GEO DataSets

(Submitter supplied) Background: The molecular machinery underpinning the establishment of this relationship is not well understood. This is especially true of the symbiont side, as previous attempts to understand the interaction between coral larvae and Symbiodiniaceae have focused nearly exclusively on the host Results: The transcriptomic response of C. goreaui to the symbiotic state was complex, the most obvious feature of which was extensive and generalized downregulation of gene expression. more...

Organism:

Cladocopium sp. C1; Cladocopium goreaui

Type:

Expression profiling by high throughput sequencing; Third-party reanalysis

Platform:

GPL27972

12 Samples

Download data: TXT

(Submitter supplied) Symbiodinium, the dinoflagellate photosymbiont of corals, is posited to become more susceptible to viral infections when heat-stressed. To investigate this hypothesis, we mined transcriptome data of a thermo-sensitive and a thermo-tolerant type C1 Symbiodinium population at ambient (27°C) and elevated (32°C) temperatures. We uncovered hundreds of transcripts from nucleocytoplasmic large double-stranded DNA viruses (NCLDVs) and the genome of a novel positive-sense single-stranded RNA virus (+ssRNAV). more...

Organism:

Cladocopium sp. C1

Type:

Expression profiling by high throughput sequencing

Platform:

GPL20890

48 Samples

Download data: FASTA, TXT, XLS, XLSX

(Submitter supplied) Using transcriptomics, we show that Symbiodinium acclimation to elevated temperature involves up-regulated expression of meiosis genes followed by up-regulated expression of numerous reactive oxygen species scavenging genes and molecular chaperone genes. Our study connects Symbiodinium transcriptional regulation with physiological heat stress responses as well as known bleaching responses of corals harboring these same Symbiodinium. more...

Organism:

Cladocopium sp. C1

Type:

Expression profiling by high throughput sequencing

Platform:

GPL20890

48 Samples

Download data: FASTA, TXT, XLS