txid222[Organism:exp] - GEO DataSets - NCBI

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Select item 2002356791.

Pathogenesis of Achromobacter xylosoxidans respiratory infections: colonization and persistence in vivo and differential gene expression in cystic fibrosis sputum

(Submitter supplied) The goals of this study were to determine differential gene expression between Achromobacter xylosoxidans clinical isolate Ax 7 in a synthetic artificial sputum media compared to a rich media control (LB).

Organism:: Achromobacter xylosoxidans

Type:: Expression profiling by high throughput sequencing

Platform:: GPL33525
6 Samples

Download data: CSV, TXT

Series

Accession:: GSE235679

ID:: 200235679

PubMed Full text in PMC Similar studies

Select item 2001522952.

RNA Atlas of Bacterial Human Pathogens Uncovers Stress Dynamics Linked to Bacterial Infections

(Submitter supplied) Pathogenic bacteria encounter a variety of stressful host environments during infection. Their responses to meet these challenges protect them from deadly damages and aid in adaption to harmful environments. Bacterial products critical for this protection are therefore interesting as suitable targets for new antimicrobials. To shed light on the complex array of molecular pathways involved in bacterial stress responses we challenged 32 diverse human pathogenic bacteria to 11 infection related stress conditions and catalogued their transcriptomes. more...

Organism:: Neisseria meningitidis; Staphylococcus epidermidis; Streptococcus pyogenes; Listeria monocytogenes; Salmonella enterica; Achromobacter xylosoxidans; Helicobacter pylori; Enterococcus faecalis; Borreliella burgdorferi; Pseudomonas aeruginosa; Legionella pneumophila; Klebsiella pneumoniae; Yersinia pseudotuberculosis; Vibrio cholerae; Streptococcus suis; Streptococcus agalactiae; Streptococcus pneumoniae; Mycobacterium tuberculosis; Burkholderia pseudomallei; Campylobacter jejuni; Francisella tularensis; Acinetobacter baumannii; Neisseria gonorrhoeae; Escherichia coli; Shigella flexneri; Aggregatibacter actinomycetemcomitans; Haemophilus influenzae; Staphylococcus aureus subsp. aureus MRSA252; Staphylococcus aureus subsp. aureus MSSA476

Type:: Expression profiling by high throughput sequencing

30 related Platforms
1122 Samples

Download data: TXT

Series

Accession:: GSE152295

ID:: 200152295

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000335253.

NextSeq 2000 (Achromobacter xylosoxidans)

Organism:: Achromobacter xylosoxidans

1 Series
6 Samples

Platform

Accession:: GPL33525

ID:: 100033525

Select item 1000286614.

Illumina NovaSeq 6000 (Achromobacter xylosoxidans)

Organism:: Achromobacter xylosoxidans

1 Series
36 Samples

Platform

Accession:: GPL28661

ID:: 100028661

Select item 3075075565.

Organism:: Achromobacter xylosoxidans

Source name:: clinical isolate Ax 7

Platform:: GPL33525
Series:: GSE235679

Download data: TXT

Sample

Accession:: GSM7507556

ID:: 307507556

SRA Run Selector

Select item 3075075556.

Organism:: Achromobacter xylosoxidans

Source name:: clinical isolate Ax 7

Platform:: GPL33525
Series:: GSE235679

Download data: TXT

Sample

Accession:: GSM7507555

ID:: 307507555

SRA Run Selector

Select item 3075075547.

Organism:: Achromobacter xylosoxidans

Source name:: clinical isolate Ax 7

Platform:: GPL33525
Series:: GSE235679

Download data: TXT

Sample

Accession:: GSM7507554

ID:: 307507554

SRA Run Selector

Select item 3075075538.

Organism:: Achromobacter xylosoxidans

Source name:: clinical isolate Ax 7

Platform:: GPL33525
Series:: GSE235679

Download data: TXT

Sample

Accession:: GSM7507553

ID:: 307507553

SRA Run Selector

Select item 3075075529.

Organism:: Achromobacter xylosoxidans

Source name:: clinical isolate Ax 7

Platform:: GPL33525
Series:: GSE235679

Download data: TXT

Sample

Accession:: GSM7507552

ID:: 307507552

SRA Run Selector

Select item 30750755110.

Organism:: Achromobacter xylosoxidans

Source name:: clinical isolate Ax 7

Platform:: GPL33525
Series:: GSE235679

Download data: TXT

Sample

Accession:: GSM7507551

ID:: 307507551

SRA Run Selector

Select item 30461078911.

A. xylosoxidans under cold shock - rep3

Organism:: Achromobacter xylosoxidans

Source name:: in vitro bacterial culture

Platform:: GPL28661
Series:: GSE152295

Sample

Accession:: GSM4610789

ID:: 304610789

SRA Run Selector

Select item 30461078812.

A. xylosoxidans under cold shock - rep2

Organism:: Achromobacter xylosoxidans

Source name:: in vitro bacterial culture

Platform:: GPL28661
Series:: GSE152295

Sample

Accession:: GSM4610788

ID:: 304610788

SRA Run Selector

Select item 30461078713.

A. xylosoxidans under cold shock - rep1

Organism:: Achromobacter xylosoxidans

Source name:: in vitro bacterial culture

Platform:: GPL28661
Series:: GSE152295

Sample

Accession:: GSM4610787

ID:: 304610787

SRA Run Selector

Select item 30461078614.

A. xylosoxidans under high temperature - rep3

Organism:: Achromobacter xylosoxidans

Source name:: in vitro bacterial culture

Platform:: GPL28661
Series:: GSE152295

Sample

Accession:: GSM4610786

ID:: 304610786

SRA Run Selector

Select item 30461078515.

A. xylosoxidans under high temperature - rep2

Organism:: Achromobacter xylosoxidans

Source name:: in vitro bacterial culture

Platform:: GPL28661
Series:: GSE152295

Sample

Accession:: GSM4610785

ID:: 304610785

SRA Run Selector

Select item 30461078416.

A. xylosoxidans under high temperature - rep1

Organism:: Achromobacter xylosoxidans

Source name:: in vitro bacterial culture

Platform:: GPL28661
Series:: GSE152295

Sample

Accession:: GSM4610784

ID:: 304610784

SRA Run Selector

Select item 30461078317.

A. xylosoxidans at stationary phase - rep3

Organism:: Achromobacter xylosoxidans

Source name:: in vitro bacterial culture

Platform:: GPL28661
Series:: GSE152295

Sample

Accession:: GSM4610783

ID:: 304610783

SRA Run Selector

Select item 30461078218.

A. xylosoxidans at stationary phase - rep2

Organism:: Achromobacter xylosoxidans

Source name:: in vitro bacterial culture

Platform:: GPL28661
Series:: GSE152295

Sample

Accession:: GSM4610782

ID:: 304610782

SRA Run Selector

Select item 30461078119.

A. xylosoxidans at stationary phase - rep1

Organism:: Achromobacter xylosoxidans

Source name:: in vitro bacterial culture

Platform:: GPL28661
Series:: GSE152295

Sample

Accession:: GSM4610781

ID:: 304610781

SRA Run Selector

Select item 30461078020.

A. xylosoxidans under oxidative stress - rep3

Organism:: Achromobacter xylosoxidans

Source name:: in vitro bacterial culture

Platform:: GPL28661
Series:: GSE152295

Sample

Accession:: GSM4610780

ID:: 304610780

SRA Run Selector

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txid222[Organism:exp] (46)
GEO DataSets
ammonia-dependent NAD(+) synthetase [Streptococcus salivarius]
ammonia-dependent NAD(+) synthetase [Streptococcus salivarius]
gi|1934310480|ref|WP_195519969.1|

Protein
ribonuclease P [Streptococcus salivarius]
ribonuclease P [Streptococcus salivarius]
gi|1937413363|ref|WP_195950563.1|

Protein
PREDICTED: Nomascus leucogenys kinesin family member 21A (KIF21A), transcript va...
PREDICTED: Nomascus leucogenys kinesin family member 21A (KIF21A), transcript variant X5, mRNA
gi|1743146608|ref|XM_030822622.1|

Nucleotide

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