GEO DataSets

(Submitter supplied) The thermophilic fungus Chaetomium thermophilum has been successfully used in the past for biochemical and high resolution structural studies of protein complexes, but subsequent functional analysis of these assemblies were hindered due to the lack of genetic tools in this thermophile, which are typically amenable in several other mesophilic eukaryotic model organisms, in particular the yeast Saccharomycers cerevisiae. more...

Organism:

Thermochaetoides thermophila

Type:

Expression profiling by high throughput sequencing

Platform:

GPL32687

9 Samples

Download data: TXT

(Submitter supplied) A correct genome annotation is fundamental for research in the field of molecular and structural biology. The annotation of the reference genome of Chaetomium thermophilum has been reported previously, but it is limited to open reading frames (ORFs) of genes and contains only a few noncoding transcripts. In this study, we identified and annotated by deep RNA sequencing full-length transcripts of C.thermophilum. more...

Organism:

Thermochaetoides thermophila

Type:

Expression profiling by high throughput sequencing

Platform:

GPL25311

3 Samples

Download data: GTF, TXT

(Submitter supplied) Eukaryotic ribosome biogenesis begins with the co-transcriptional assembly of the 90S pre-ribosome. The ‘U three protein’ (UTP) complexes and snoRNA particles arrange around the nascent pre-ribosomal RNA chaperoning its folding and further maturation. The earliest event in this hierarchical process is the binding of the UTP-A complex to the 5’-end of the pre-ribosomal RNA (5’-ETS). This oligomeric complex predominantly consists of β-propeller and α-solenoidal proteins. more...

Organism:

Thermochaetoides thermophila; Saccharomyces cerevisiae

Type:

Other

Platform:

GPL23386

2 Samples

Download data: FASTA, PILEUP