txid1450434[Organism:noexp] - GEO DataSets - NCBI

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Items: 16

Select item 2000866401.

Comparative genomics and transcriptomics of Escherichia coli isolates carrying virulence factors of both enteropathogenic and enterotoxigenic Escherichia coli

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Escherichia coli 401140; Escherichia coli ETEC H10407; Escherichia coli O127:H6 str. E2348/69; Escherichia coli 102712; Escherichia coli 402290; Escherichia coli HS; Escherichia coli 102651

Type:: Expression profiling by high throughput sequencing

7 related Platforms
52 Samples

Series

Accession:: GSE86640

ID:: 200086640

PubMed Full text in PMC Similar studies

Select item 2000866382.

Comparative genomics and transcriptomics of Escherichia coli isolates carrying virulence factors of both enteropathogenic and enterotoxigenic Escherichia coli 401140

(Submitter supplied) Global transcriptional analysis of EPEC/ETEC hybrid isolates.

Organism:: Escherichia coli 401140

Type:: Expression profiling by high throughput sequencing

Platform:: GPL21006
8 Samples

Download data: TXT

Series

Accession:: GSE86638

ID:: 200086638

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000738853.

Comparative transcriptomics of the virulence regulons of enteropathogenic Escherichia coli from diverse phylogenomic lineages

(Submitter supplied) Global transcriptional analysis of eleven EPEC strains, including the most frequently studied strains used in laboratory studies investigating EPEC virulence mechanisms.

Organism:: Escherichia coli E110019; Escherichia coli C581_05; Escherichia coli B171; Escherichia coli 100329; Escherichia coli 302053; Escherichia coli 401140; Escherichia coli; Escherichia coli O127:H6 str. E2348/69; Escherichia coli 103385; Escherichia coli 300059; Escherichia coli 402290

Type:: Expression profiling by high throughput sequencing

11 related Platforms
44 Samples

Download data: TXT

Series

Accession:: GSE73885

ID:: 200073885

SRA Run Selector

Select item 1000210064.

Illumina HiSeq 2000 (Escherichia coli 401140)

Organism:: Escherichia coli 401140

3 Series
12 Samples

Platform

Accession:: GPL21006

ID:: 100021006

Select item 3023082565.

E. coli 401140_DMEMB_0.5_BR2

Organism:: Escherichia coli 401140

Source name:: Escherichia coli cells

Platform:: GPL21006
Series:: GSE86638 GSE86640

Sample

Accession:: GSM2308256

ID:: 302308256

SRA Run Selector

Select item 3023082556.

E. coli 401140_DMEMB_0.5_BR1

Organism:: Escherichia coli 401140

Source name:: Escherichia coli cells

Platform:: GPL21006
Series:: GSE86638 GSE86640

Sample

Accession:: GSM2308255

ID:: 302308255

SRA Run Selector

Select item 3023082547.

E. coli 401140_LBB_0.5_BR2

Organism:: Escherichia coli 401140

Source name:: Escherichia coli cells

Platform:: GPL21006
Series:: GSE86638 GSE86640

Sample

Accession:: GSM2308254

ID:: 302308254

SRA Run Selector

Select item 3023082538.

E. coli 401140_LBB_0.5_BR1

Organism:: Escherichia coli 401140

Source name:: Escherichia coli cells

Platform:: GPL21006
Series:: GSE86638 GSE86640

Sample

Accession:: GSM2308253

ID:: 302308253

SRA Run Selector

Select item 3023082529.

E. coli 401140_DMEM_0.5_BR2

Organism:: Escherichia coli 401140

Source name:: Escherichia coli cells

Platform:: GPL21006
Series:: GSE86638 GSE86640

Sample

Accession:: GSM2308252

ID:: 302308252

SRA Run Selector

Select item 30230825110.

E. coli 401140_DMEM_0.5_BR1

Organism:: Escherichia coli 401140

Source name:: Escherichia coli cells

Platform:: GPL21006
Series:: GSE86638 GSE86640

Sample

Accession:: GSM2308251

ID:: 302308251

SRA Run Selector

Select item 30230825011.

E. coli 401140_LB_0.5_BR2

Organism:: Escherichia coli 401140

Source name:: Escherichia coli cells

Platform:: GPL21006
Series:: GSE86638 GSE86640

Sample

Accession:: GSM2308250

ID:: 302308250

SRA Run Selector

Select item 30230824912.

E. coli 401140_LB_0.5_BR1

Organism:: Escherichia coli 401140

Source name:: Escherichia coli cells

Platform:: GPL21006
Series:: GSE86638 GSE86640

Sample

Accession:: GSM2308249

ID:: 302308249

SRA Run Selector

Select item 30190495413.

401140_DMEM_0.5_BR2

Organism:: Escherichia coli 401140

Source name:: Escherichia coli cells

Platform:: GPL21006
Series:: GSE73885

Sample

Accession:: GSM1904954

ID:: 301904954

SRA Run Selector

Select item 30190495314.

401140_DMEM_0.5_BR1

Organism:: Escherichia coli 401140

Source name:: Escherichia coli cells

Platform:: GPL21006
Series:: GSE73885

Sample

Accession:: GSM1904953

ID:: 301904953

SRA Run Selector

Select item 30190495215.

401140_LB_0.5_BR2

Organism:: Escherichia coli 401140

Source name:: Escherichia coli cells

Platform:: GPL21006
Series:: GSE73885

Sample

Accession:: GSM1904952

ID:: 301904952

SRA Run Selector

Select item 30190495116.

401140_LB_0.5_BR1

Organism:: Escherichia coli 401140

Source name:: Escherichia coli cells

Platform:: GPL21006
Series:: GSE73885

Sample

Accession:: GSM1904951

ID:: 301904951

SRA Run Selector

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