GEO DataSets

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Bursaphelenchus xylophilus

Type:

Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing

Platform:

GPL33730

24 Samples

Download data: TXT

(Submitter supplied) DNA methylation is a pivotal process that regulates gene expression and facilitates rapid adaptation to challenging environments. The pine wood nematode (PWN; Bursaphelenchus xylophilus), the causative agent of pine wilt disease, survives and spreads at low temperatures through third-stage dispersal larvae, making it a major pathogen for pine wood in Asia. To comprehend the impact of DNA methylation on the formation and environmental adaptation of third-stage dispersal larvae, we conducted whole-genome bisulfite sequencing and transcriptional sequencing on both the third-stage dispersal larvae and three other stages propagative larvae of PWN.

Organism:

Bursaphelenchus xylophilus

Type:

Expression profiling by high throughput sequencing

Platform:

GPL33730

12 Samples

Download data: XLS

(Submitter supplied) DNA methylation is a pivotal process that regulates gene expression and facilitates rapid adaptation to challenging environments. The pine wood nematode (PWN; Bursaphelenchus xylophilus), the causative agent of pine wilt disease, survives and spreads at low temperatures through third-stage dispersal larvae, making it a major pathogen for pine wood in Asia. To comprehend the impact of DNA methylation on the formation and environmental adaptation of third-stage dispersal larvae, we conducted whole-genome bisulfite sequencing and transcriptional sequencing on both the third-stage dispersal larvae and three other stages propagative larvae of PWN.

Organism:

Bursaphelenchus xylophilus

Type:

Methylation profiling by high throughput sequencing

Platform:

GPL33730

12 Samples

Download data: TXT

(Submitter supplied) to profile the adverse effects of an emamectin benzoate trunk-injection agent on pine wood nematode Bursaphelenchus xylophilus by analysing differential transcripts from the nematode whole genome through next-generation high-throughput sequencing.

Organism:

Bursaphelenchus xylophilus

Type:

Expression profiling by high throughput sequencing

Platform:

GPL26988

12 Samples

Download data: TXT

(Submitter supplied) Bursaphelenchus xylophilus is known as the causative agent of pine wilt disease with complex life cycles. In this research, newly published Bursaphelenchus xylophilus genome data were employed to annotate its miRNAs based on deep sequencing technologies. Four small RNA libraries derived from different infection stages of pine wilt disease were constructed and sequenced. Consequently, we obtained hundreds of evolutionarily conserved miRNAs as well as novel miRNA candidates. more...

Organism:

Bursaphelenchus xylophilus

Type:

Non-coding RNA profiling by high throughput sequencing

Platform:

GPL19287

4 Samples

Download data: TXT

(Submitter supplied) This study compared the different gene expression of Bursaphelenchus xylophilus in two growth conditions (growing on Botrytis cinerea and inoculating Pinus thunbergii). The goal was to analyze the specifically-expressed genes of the pine wood nematode involved in the early interaction between B. xylophilus and P. thunbergii and screen the pathogenesis related genes of B. xylophilus.

Organism:

Bursaphelenchus xylophilus

Type:

Expression profiling by array

Platform:

GPL17663

6 Samples

Download data: TXT

(Submitter supplied) The ID column represents the Agilent Probe name. Protocol: see manufacturer's web site at http://www.agilent.com/

Organism:

Bursaphelenchus xylophilus

1 Series

6 Samples

Download data: TXT