txid110835[Organism:noexp] - GEO DataSets - NCBI

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Select item 2002010431.

Genome Wide Transcriptome Analysis of tef (Eragrostis tef) Under Long-Term Low Calcium Stress

(Submitter supplied) Calcium (Ca2+) is one of the essential mineral nutrients for plant growth and development. However, the effects of long-term Ca2+ deficiency in orphan crops such as tef (Zucc.) Trotter] which accumulate high levels of Fe in the grains remained unknown. Tef is a staple crop for nearly 70 million people in East Africa, particularly Ethiopia and Eritrea. It is rich in mineral nutrients (Ca+2, Fe, Zn and Mn), vitamins and essential amino acids. more...

Organism:: Eragrostis tef

Type:: Expression profiling by high throughput sequencing

Platform:: GPL32184
16 Samples

Download data: CSV

Series

Accession:: GSE201043

ID:: 200201043

PubMed Full text in PMC Similar studies

Select item 2001931302.

Analysis of MiRNAs responsive to long-term Ca deficiency in tef (Eragrostis tef (Zucc.) Trotter)

(Submitter supplied) miRNAs play an important role in growth, development, stress resilience and epigenetic modifications of plants. However, the effect of calcium nutrition on miRNA expression in orphan crops such as tef ((Eragrostis tef) remained unknown. In this study, we analyzed genome-wise miRNAs of roots and shoots in response to long-term calcium deficiency in tef. MiRNA-seq followed by bioinformatic analysis identified a large number of small RNAs with size ranging from 17bp to 35bp. more...

Organism:: Eragrostis tef

Type:: Non-coding RNA profiling by high throughput sequencing

Platform:: GPL31179
16 Samples

Download data: XLSX

Series

Accession:: GSE193130

ID:: 200193130

PubMed Full text in PMC Similar studies

Select item 1000321843.

Illumina HiSeq 4000 (Eragrostis tef)

Organism:: Eragrostis tef

1 Series
16 Samples

Platform

Accession:: GPL32184

ID:: 100032184

Select item 1000311794.

Illumina HiSeq 2500 (Eragrostis tef)

Organism:: Eragrostis tef

1 Series
16 Samples

Platform

Accession:: GPL31179

ID:: 100031179

Select item 3060495995.

Organism:: Eragrostis tef

Source name:: Control shoots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049599

ID:: 306049599

SRA Run Selector

Select item 3060495986.

Organism:: Eragrostis tef

Source name:: Control shoots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049598

ID:: 306049598

SRA Run Selector

Select item 3060495977.

Organism:: Eragrostis tef

Source name:: Control shoots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049597

ID:: 306049597

SRA Run Selector

Select item 3060495968.

Organism:: Eragrostis tef

Source name:: Control shoots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049596

ID:: 306049596

SRA Run Selector

Select item 3060495959.

Organism:: Eragrostis tef

Source name:: Control roots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049595

ID:: 306049595

SRA Run Selector

Select item 30604959410.

Organism:: Eragrostis tef

Source name:: Control roots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049594

ID:: 306049594

SRA Run Selector

Select item 30604959311.

Organism:: Eragrostis tef

Source name:: Control roots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049593

ID:: 306049593

SRA Run Selector

Select item 30604959212.

Organism:: Eragrostis tef

Source name:: Control roots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049592

ID:: 306049592

SRA Run Selector

Select item 30604959113.

Organism:: Eragrostis tef

Source name:: Low calcium shoots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049591

ID:: 306049591

SRA Run Selector

Select item 30604959014.

Organism:: Eragrostis tef

Source name:: Low calcium shoots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049590

ID:: 306049590

SRA Run Selector

Select item 30604958915.

Organism:: Eragrostis tef

Source name:: Low calcium shoots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049589

ID:: 306049589

SRA Run Selector

Select item 30604958816.

Organism:: Eragrostis tef

Source name:: Low calcium shoots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049588

ID:: 306049588

SRA Run Selector

Select item 30604958717.

Organism:: Eragrostis tef

Source name:: Low calcium roots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049587

ID:: 306049587

SRA Run Selector

Select item 30604958618.

Organism:: Eragrostis tef

Source name:: Low calcium roots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049586

ID:: 306049586

SRA Run Selector

Select item 30604958519.

Organism:: Eragrostis tef

Source name:: Low calcium roots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049585

ID:: 306049585

SRA Run Selector

Select item 30604958420.

Organism:: Eragrostis tef

Source name:: Low calcium roots

Platform:: GPL32184
Series:: GSE201043

Sample

Accession:: GSM6049584

ID:: 306049584

SRA Run Selector

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