GEO DataSets

(Submitter supplied) Light dependent gene expression in D. shibae wildtype compared to the gene expression in the transposonmutants D. shibae Dshi_1135::Tn, D. shibae ppaA::Tn and D. shibae ppsR::Tn. Dinoroseobacter shibae DFL12T (DSM 16493T) and the transposonmutants D. shibae Dshi_1135::Tn, D. shibae ppaA::Tn and D. shibae ppsR::Tn were grown in artificial saltwater minimal medium (SWM) in baffled flasks shaking at 180 rpm and 30 °C and incubation was performed under light, dark and bluelight conditions. more...

Organism:

Dinoroseobacter shibae; Dinoroseobacter shibae DFL 12 = DSM 16493

Type:

Expression profiling by array

Platform:

GPL11243

44 Samples

Download data: TXT

(Submitter supplied) To unravel the adaptation strategies of D. shibae to anaerobic conditions in microaerobic to anaerobic parts of the ocean and to define the underlying regulatory network an anaerobic shift experiment in Salt-Water-Medium in a chemostate was established. Transcriptome analyses were used to investigate the physiological status of D. shibae under this conditions.

Organism:

Dinoroseobacter shibae; Dinoroseobacter shibae DFL 12 = DSM 16493

Type:

Expression profiling by array

Platform:

GPL11243

40 Samples

Download data: TXT

(Submitter supplied) Expression profiling of the stress response of the marine Planctomycete Rhodopirellula baltica after a salinity up-shift. R. baltica cultures were grown at 28°C in mineral media with 17.5% salinity and up-shifted to 59.9%. Samples were taken after 10, 20, 40, 60 and 300min and compared with cultures before the up-shift.

Organism:

Rhodopirellula baltica SH 1; Rhodopirellula baltica

Type:

Expression profiling by array

Platform:

GPL7654

18 Samples

Download data: TXT

(Submitter supplied) Expression profiling of the stress response of the marine Planctomycete Rhodopirellula baltica after a temperature up-shift. R. baltica cultures were grown at 28°C and then shifted to 6°C. Samples were taken after 10, 20, 40, 60 and 300min and compared with cultures before the up-shift (28°C).

Organism:

Rhodopirellula baltica; Rhodopirellula baltica SH 1

Type:

Expression profiling by array

Platform:

GPL7654

18 Samples

Download data: TXT

(Submitter supplied) Expression profiling of the stress response of the marine Planctomycete Rhodopirellula baltica after a temperature up-shift. R. baltica cultures were grown at 28°C and then shifted to 37°C. Samples were taken after 10, 20, 40, 60 and 300min and compared with cultures before the up-shift (28°C). Time series experiment, whole genome array

Organism:

Rhodopirellula baltica; Rhodopirellula baltica SH 1

Type:

Expression profiling by array

Platform:

GPL7654

18 Samples

Download data: TXT