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Items: 4

1.

Unistrand piRNA clusters are an evolutionarily conserved mechanism to suppress endogenous retroviruses across the Drosophila genus

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Drosophila mojavensis; Drosophila persimilis; Drosophila azteca; Drosophila takahashii; Drosophila erecta; Drosophila pseudoobscura; Drosophila ficusphila; Drosophila melanogaster; Drosophila simulans; Drosophila yakuba; Drosophila suzukii; Drosophila ananassae; Drosophila subobscura; Drosophila virilis; Drosophila biarmipes
Type:
Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
20 related Platforms
118 Samples
Download data: BW, NARROWPEAK
Series
Accession:
GSE225889
ID:
200225889

PubMed Full text in PMC Similar studies

2.

Unistrand piRNA clusters are an evolutionarily conserved mechanism to suppress endogenous retroviruses across the Drosophila genus [small RNA-Seq]

(Submitter supplied) The PIWI-interacting RNA (piRNA) pathway plays a crucial role in preventing endogenous genomic parasites, transposable elements (TEs), from damaging the genetic material of animal gonadal cells. Specific regions in the genome, called piRNA clusters, define each species’ piRNA repertoire and therefore its capacity to recognize and silence transposons. In the somatic cells of the Drosophila melanogaster ovary, the flamenco (flam) unistrand cluster is the main source of piRNAs and primarily regulates Gypsy family TEs that are able to form virus-like particles and infect neighbouring germ cells. more...
Organism:
Drosophila persimilis; Drosophila takahashii; Drosophila bifasciata; Drosophila melanogaster; Drosophila pseudoobscura; Drosophila subobscura; Drosophila ficusphila; Drosophila ananassae; Drosophila erecta; Drosophila mojavensis; Drosophila virilis; Drosophila azteca; Drosophila biarmipes; Drosophila simulans; Drosophila yakuba; Drosophila suzukii
Type:
Non-coding RNA profiling by high throughput sequencing
15 related Platforms
65 Samples
Download data: BW
Series
Accession:
GSE225888
ID:
200225888

PubMed Full text in PMC Similar studies

3.

Illumina NovaSeq 6000 (Drosophila pseudoobscura)

Organism:
Drosophila pseudoobscura
3 Series
6 Samples
Download data
Platform
Accession:
GPL33168
ID:
100033168

4.

Dpse.ovary_FC.1 small-RNA-Seq

Organism:
Drosophila pseudoobscura
Source name:
Dpse.ovary_FC.1
Platform:
GPL33168
Series:
GSE225888 GSE225889
Download data: BW
Sample
Accession:
GSM7059881
ID:
307059881

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db=gds|term=GSM7059881[Accession]|query=5|qty=17|blobid=MCID_673161c5768a192dda5843bb|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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