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Items: 3

1.

Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment

(Submitter supplied) Transcriptional heterogeneity among malignant cells of a tumor has been studied in individual cancer types and shown to be organized into cancer cell states; however, it remains unclear to what extent these states span tumor types, constituting general features of cancer. Here, we perform a pan-cancer single-cell RNA-Seq analysis across 15 cancer types and identify a catalog of gene modules whose expression defines recurrent cancer cell states including ‘stress’, ‘interferon response’, ‘epithelial-mesenchymal transition’, ‘metal response’, ‘basal’ and ‘ciliated’. more...
Organism:
Homo sapiens; Mus musculus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL18573 GPL19057 GPL19415
31 Samples
Download data: CSV, H5, JPG, JSON, MTX, PNG, TSV
Series
Accession:
GSE203612
ID:
200203612
2.

Illumina NextSeq 500 (Homo sapiens)

Platform
Accession:
GPL18573
ID:
100018573
3.

NYU_OVCA2 inDrop

Organism:
Homo sapiens
Source name:
Single-cell RNA-Seq of patient primary ovarian carcinoma
Platform:
GPL18573
Series:
GSE203612
Download data: MTX, TSV
Sample
Accession:
GSM6177615
ID:
306177615
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