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Items: 3

1.

Atlas of chromatin accessibility and translatome of tomato and rice root tip cell types

(Submitter supplied) Plant species have evolved specialized cell types and regulatory programs. To understand this diversity, we profiled tomato cell type translatomes and chromatin accessibility. While cell type expression signatures are diverse, some genes exhibit robust cell type expression across time and environments. Using xylem differentiation as a model, newly described, repurposed and conserved genes illustrate this spatial variation. more...
Organism:
Solanum lycopersicum; Oryza sativa Japonica Group
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL21762 GPL25655 GPL21812
145 Samples
Download data: BED, BW, CSV
Series
Accession:
GSE149217
ID:
200149217
2.

Illumina HiSeq 4000 (Solanum lycopersicum)

Organism:
Solanum lycopersicum
20 Series
488 Samples
Download data
Platform
Accession:
GPL25655
ID:
100025655
3.

X35S-TR-Rep3

Organism:
Solanum lycopersicum
Source name:
Whole root system of 2-month-old tomato plants.
Platform:
GPL25655
Series:
GSE149217
Download data
Sample
Accession:
GSM4494427
ID:
304494427
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db=gds|term=GSM4494427[Accession]|query=2|qty=3|blobid=MCID_66e17cb39fd03c7db379cee8|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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