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Items: 3

1.

Single-cell three dimensional genome structures of rice egg, sperm, and unicellular zygote

(Submitter supplied) Chromatin conformation capture assays, such as 3C and Hi-C, allow for studies of three-dimensional (3D) genome structures in bulk samples through proximity ligation of DNA. However, the difference between cells can only be observed by single-cell measurements that avoid ensemble averaging3, 4,5. To study 3D chromatin organization and dynamics before and after fertilization in flowering plants, we analyzed the 3D genomes of rice egg, sperm, and unicellular zygote as well as shoot cells. more...
Organism:
Oryza sativa Japonica Group
Type:
Other
Platform:
GPL23876
15 Samples
Download data: PDB, TXT
Series
Accession:
GSE123109
ID:
200123109

PubMed Similar studies SRA Run Selector

2.

HiSeq X Ten (Oryza sativa Japonica Group)

Organism:
Oryza sativa Japonica Group
21 Series
314 Samples
Download data
Platform
Accession:
GPL23876
ID:
100023876

3.

Single-cell Hi-C data of sperm 1

Organism:
Oryza sativa Japonica Group
Source name:
Single sperm of rice
Platform:
GPL23876
Series:
GSE123109
Download data: PDB, TXT
Sample
Accession:
GSM3495877
ID:
303495877

SRA Run Selector

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db=gds|term=GSM3495877[Accession]|query=13|qty=2|blobid=MCID_673744ea2874ea24c4305872|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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