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Items: 3

1.

m6A-RNA mapping, SND1-RNA binding profile mapping and SND1-depletion in KSHV-infected B-lymphocytes

(Submitter supplied) We have mapped m6A sites and endogenous SND1 binding sites in the viral and cellular transcriptome using TREx BCBL1-Rta cells. In addition, we have depleted SND1 in TREx BCBL1-Rta cells and BCBL1 cells and analyzed their RNA expression profile both during latency and lytic replication.
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platforms:
GPL21290 GPL16791
43 Samples
Download data: TXT, XLSX
Series
Accession:
GSE119026
ID:
200119026

PubMed Full text in PMC Similar studies Analyze with GEO2RSRA Run Selector

2.

Illumina HiSeq 3000 (Homo sapiens)

Organism:
Homo sapiens
1138 Series
28241 Samples
Download data
Platform
Accession:
GPL21290
ID:
100021290

3.

SND1 KO Rep2 Lytic TREX

Organism:
Homo sapiens
Source name:
SND1 KO Lytic TREX, KSHV-infected B-lymphocytes
Platform:
GPL21290
Series:
GSE119026
Download data
Sample
Accession:
GSM3356784
ID:
303356784

SRA Run Selector

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db=gds|term=GSM3356784[Accession]|query=2|qty=2|blobid=MCID_672b018c1e37ea1d715d8fbc|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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