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Items: 3

1.

Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution

(Submitter supplied) We introduce Chemical-crosslinking Assisted Proximity Capture (CAP-C), a method that utilizes multi-functional chemical crosslinkers with defined physical sizes to directly assess spatial distances between nuclear genomic sequences. CAP-C avoids limitations caused by extensive protein-DNA crosslinking in most in situ methods, and thus generates chromatin contact maps at high resolution with low background noise.
Organism:
Homo sapiens; Mus musculus; Drosophila melanogaster
Type:
Genome binding/occupancy profiling by high throughput sequencing; Other
6 related Platforms
76 Samples
Download data: BIGWIG, HIC, NARROWPEAK, TXT
Series
Accession:
GSE110061
ID:
200110061

SRA Run Selector

2.

Illumina NextSeq 500 (Mus musculus)

Organism:
Mus musculus
10275 Series
295680 Samples
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Platform
Accession:
GPL19057
ID:
100019057

3.

F123 input DNA

Organism:
Mus musculus
Source name:
mouse embryonic stem cells
Platform:
GPL19057
Series:
GSE110061
Download data: BIGWIG
Sample
Accession:
GSM2977190
ID:
302977190

SRA Run Selector

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db=gds|term=GSM2977190[Accession]|query=7|qty=4|blobid=MCID_672eb23c5300667000639705|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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