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Items: 3

1.

Zic3 interacts with distant regulatory elements to regulate zebrafish developmental genes

(Submitter supplied) Zic3 regulates early embryonic patterning in vertebrates. Its loss-of-function disrupts gastrulation, left-right patterning, and neurogenesis. We use the zebrafish as a model to study the developmental role of Zic3 in vivo. Using a combination of two genomics approaches – ChIP-seq and microarray, we identified Zic3 targets, which include genes from the Nodal and Wnt pathways, and show for the first time cis-regulation of these genes by Zic3 using in vivo enhancer assay. more...
Organism:
Danio rerio
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL10164
4 Samples
Download data: BED, TXT
Series
Accession:
GSE41458
ID:
200041458

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina Genome Analyzer (Danio rerio)

Organism:
Danio rerio
13 Series
175 Samples
Download data
Platform
Accession:
GPL10164
ID:
100010164

3.

Zic3 8hrs embryo

Organism:
Danio rerio
Source name:
8hpf embryos
Platform:
GPL10164
Series:
GSE41458
Download data: TXT
Sample
Accession:
GSM1017643
ID:
301017643

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db=gds|term=GSM1017643[Accession]|query=6|qty=2|blobid=MCID_6737c4a4bea12f4e7c7dfc4d|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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