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Items: 12

1.

Genome-wide assay of Vezf1 and RNA Polymerase II binding

(Submitter supplied) The protein Vezf1 plays multiple roles important for embryonic development. In Vezf1-/- mouse embryonic stem (MES) cells our earlier data showed widespread changes in gene expression profiles, including decreased expression of the full length active isoform of Dnmt3b methyltransferase and concomitant genome wide reduction in DNA methylation. Here we show that, in HeLaS3 cells, there is a strong genome-wide correlation between Vezf1 binding and peaks of elongating Ser2-P Pol ll, reflecting Vezf1 dependent slowing of elongation. more...
Organism:
Mus musculus; Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL11002 GPL10999
9 Samples
Download data: WIG
Series
Accession:
GSE34785
ID:
200034785

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina Genome Analyzer IIx (Mus musculus)

Organism:
Mus musculus
895 Series
7710 Samples
Download data
Platform
Accession:
GPL11002
ID:
100011002

3.

Illumina Genome Analyzer IIx (Homo sapiens)

Organism:
Homo sapiens
1096 Series
9927 Samples
Download data
Platform
Accession:
GPL10999
ID:
100010999

4.

Input HELA Sample 2

Organism:
Homo sapiens
Source name:
HeLa_Input DNA
Platform:
GPL10999
Series:
GSE34785
Download data
Sample
Accession:
GSM866200
ID:
300866200

SRA Run Selector

5.

Input HELA Sample 1

Organism:
Homo sapiens
Source name:
HeLa_Input DNA
Platform:
GPL10999
Series:
GSE34785
Download data
Sample
Accession:
GSM866199
ID:
300866199

SRA Run Selector

6.

RNA Polymerase 2 ChIP-Seq HELA

Organism:
Homo sapiens
Source name:
HeLa_RNA Polymerase 2 ChIP-Seq
Platform:
GPL10999
Series:
GSE34785
Download data
Sample
Accession:
GSM866198
ID:
300866198

SRA Run Selector

7.

HA-flag-Vezf1 ChIP-Seq Sample 2

Organism:
Homo sapiens
Source name:
HeLa_HA-flag-Vezf1 ChIP-Seq
Platform:
GPL10999
Series:
GSE34785
Download data
Sample
Accession:
GSM866197
ID:
300866197

SRA Run Selector

8.

HA-flag-Vezf1 ChIP-Seq Sample 1

Organism:
Homo sapiens
Source name:
HeLa_HA-flag-Vezf1 ChIP-Seq
Platform:
GPL10999
Series:
GSE34785
Download data
Sample
Accession:
GSM866196
ID:
300866196

SRA Run Selector

9.

Input Vezf1 ko

Organism:
Mus musculus
Source name:
mm9ES_Vezf1 ko_Input
Platform:
GPL11002
Series:
GSE34785
Download data
Sample
Accession:
GSM866204
ID:
300866204

SRA Run Selector

10.

RNA Polymerase 2 ChIP-Seq mm9ES Vezf1 ko

Organism:
Mus musculus
Source name:
mm9ES_Vezf1_ko_RNA Polymerase 2 ChIP-Seq
Platform:
GPL11002
Series:
GSE34785
Download data
Sample
Accession:
GSM866203
ID:
300866203

SRA Run Selector

11.

Input mm9ES wt

Organism:
Mus musculus
Source name:
mm9ES_wt_Input DNA
Platform:
GPL11002
Series:
GSE34785
Download data
Sample
Accession:
GSM866202
ID:
300866202

SRA Run Selector

12.

RNA Polymerase 2 ChIP-Seq mm9ES wt

Organism:
Mus musculus
Source name:
mm9ES_wt_RNA Polymerase 2 ChIP-Seq
Platform:
GPL11002
Series:
GSE34785
Download data
Sample
Accession:
GSM866201
ID:
300866201

SRA Run Selector

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db=gds|term=GSE34785[Accession]|query=1|qty=3|blobid=MCID_663416b9679af6518b5df278|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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