GSE29806[Accession] - GEO DataSets - NCBI

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Select item 2000298061.

Naturally transmitted segmented filamentous bacteria segregate with diabetes protection in NOD mice

(Submitter supplied) Vertebrates typically harbor a rich gastrointestinal microbiota, which has co-evolved with the host over millennia and is essential for several of its physiological functions, in particular maturation of the immune system. Recent studies have highlighted the importance of a single bacterial species, segmented filamentous bacteria (SFB), in inducing a robust T helper (Th)17 population in the small intestinal lamina propria (SI-LP) of the mouse gut. more...

Organism:: Mus musculus

Type:: Expression profiling by array

Dataset:: GDS3987
Platform:: GPL6246
26 Samples

Download data: CEL

Series

Accession:: GSE29806

ID:: 200029806

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 39872.

Full record GDS3987

Segmented filamentous bacteria gut colonization effect on nonobese diabetic mice: T cells

Analysis of T cells from spleen and gut of SFB-positive NOD mice. SFB induces a robust T-helper cell type 17 population in small-intestinal lamina propria (SI-LP). Results provide insight into molecular mechanisms underlying the strong cosegregation of SFB positivity and protection from diabetes.

Organism:: Mus musculus

Type:: Expression profiling by array, count, 2 age, 2 gender, 2 other, 3 tissue sets

Platform:: GPL6246
Series:: GSE29806
26 Samples

Download data: CEL

DataSet

Accession:: GDS3987

ID:: 3987

PubMed Full text in PMC Similar studies GEO Profiles Analyze DataSet

Select item 1000062463.

[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 07, 2012: annotation table updated with netaffx build 32 July 01, 2016: annotation table updated with netaffx build 35 Protocol: See manufacturer's web site

Organism:: Mus musculus

143 DataSets
2504 Series
28 Related Platforms
30419 Samples

Platform

Accession:: GPL6246

ID:: 100006246

Select item 3007388034.

NOD.LILP.SFBneg-4

Organism:: Mus musculus

Source name:: Prep from the large intestinal lamina propria of 6 wk old male NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. Typed SFB negative (NRB75.M2).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738803

ID:: 300738803

Select item 3007388025.

NOD.LILP.SFBneg-3

Organism:: Mus musculus

Source name:: Prep from the large intestinal lamina propria of 6 wk old female NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. Typed SFB negative (NRB75.F).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738802

ID:: 300738802

Select item 3007388016.

NOD.LILP.SFBneg-2

Organism:: Mus musculus

Source name:: Prep from the large intestinal lamina propria of 6 wk old male NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. Typed SFB negative (NRB6.M2).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738801

ID:: 300738801

Select item 3007388007.

NOD.LILP.SFBneg-1

Organism:: Mus musculus

Source name:: Prep from the large intestinal lamina propria of 6 wk old female NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. Typed SFB negative (NRB66.F2).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738800

ID:: 300738800

Select item 3007387998.

NOD.LILP.SFBpos-4

Organism:: Mus musculus

Source name:: Prep from the large intestinal lamina propria of 6 wk old male NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. Typed SFB positive (NRB65.M2).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738799

ID:: 300738799

Select item 3007387989.

NOD.LILP.SFBpos-3

Organism:: Mus musculus

Source name:: Prep from the large intestinal lamina propria of 6 wk old female NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. Typed SFB positive (NRB65.F2).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738798

ID:: 300738798

Select item 30073879710.

NOD.SP.SFBneg-6

Organism:: Mus musculus

Source name:: Prep from the spleen of 10 wk old male NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. SFB negative (Jax).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738797

ID:: 300738797

Select item 30073879611.

NOD.SP.SFBneg-5

Organism:: Mus musculus

Source name:: Prep from the spleen of 10 wk old female NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. SFB negative (Jax).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738796

ID:: 300738796

Select item 30073879512.

NOD.SP.SFBneg-4

Organism:: Mus musculus

Source name:: Prep from the spleen of 6 wk old male NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. Typed SFB negative (NRB75.M2).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738795

ID:: 300738795

Select item 30073879413.

NOD.SP.SFBneg-3

Organism:: Mus musculus

Source name:: Prep from the spleen of 6 wk old female NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. Typed SFB negative (NRB75.F).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738794

ID:: 300738794

Select item 30073879314.

NOD.SP.SFBneg-2

Organism:: Mus musculus

Source name:: Prep from the spleen of 6 wk old male NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. Typed SFB negative (NRB6.M2).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738793

ID:: 300738793

Select item 30073879215.

NOD.SP.SFBneg-1

Organism:: Mus musculus

Source name:: Prep from the spleen of 6 wk old female NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. Typed SFB negative (NRB66.F2).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738792

ID:: 300738792

Select item 30073879116.

NOD.LP.SFBneg-6

Organism:: Mus musculus

Source name:: Prep from the small intestinal lamina propria of 10 wk old male NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. SFB negative (Jax).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738791

ID:: 300738791

Select item 30073879017.

NOD.LP.SFBneg-5

Organism:: Mus musculus

Source name:: Prep from the small intestinal lamina propria of 10 wk old female NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. SFB negative (Jax).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738790

ID:: 300738790

Select item 30073878918.

NOD.LP.SFBneg-4

Organism:: Mus musculus

Source name:: Prep from the small intestinal lamina propria of 6 wk old male NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. Typed SFB negative (NRB75.M2).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738789

ID:: 300738789

Select item 30073878819.

NOD.LP.SFBneg-3

Organism:: Mus musculus

Source name:: Prep from the small intestinal lamina propria of 6 wk old female NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. Typed SFB negative (NRB75.F).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738788

ID:: 300738788

Select item 30073878720.

NOD.LP.SFBneg-2

Organism:: Mus musculus

Source name:: Prep from the small intestinal lamina propria of 6 wk old male NOD mice from our NRB colony. Sorted on CD45+CD4+TCRb+CD8a-CD11b-CD11c-B220-GR1-CD19-. Used CBDM lab protocol. Typed SFB negative (NRB6.M2).

Platform:: GPL6246
Series:: GSE29806
Dataset:: GDS3987

Download data: CEL

Sample

Accession:: GSM738787

ID:: 300738787

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