GSE240985[Accession] - GEO DataSets - NCBI

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Select item 2002409851.

Circular extrachromosomal DNA promotes tumor heterogeneity in high-risk medulloblastomas

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Other; Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL11154 GPL24676
54 Samples

Download data: BW, HIC, NARROWPEAK, TXT

Series

Accession:: GSE240985

ID:: 200240985

PubMed Full text in PMC Similar studies

Select item 1000246762.

Illumina NovaSeq 6000 (Homo sapiens)

Organism:: Homo sapiens

16663 Series
924436 Samples

Platform

Accession:: GPL24676

ID:: 100024676

Select item 1000111543.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10524 Series
183381 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 3077133374.

RCMB56-ht snRNA+ATAC-seq (ATAC)

Organism:: Homo sapiens

Source name:: medulloblastoma

Platform:: GPL24676
Series:: GSE240984 GSE240985

Sample

Accession:: GSM7713337

ID:: 307713337

SRA Run Selector

Select item 3077133365.

RCMB56-ht snRNA+ATAC-seq (RNA)

Organism:: Homo sapiens

Source name:: medulloblastoma

Platform:: GPL24676
Series:: GSE240984 GSE240985

Sample

Accession:: GSM7713336

ID:: 307713336

SRA Run Selector

Select item 3077102376.

RCMB56-ht, SHH, ATAC

Organism:: Homo sapiens

Source name:: medulloblastoma

Platform:: GPL24676
Series:: GSE240830 GSE240985

Download data: BW, NARROWPEAK

Sample

Accession:: GSM7710237

ID:: 307710237

SRA Run Selector

Select item 3077102367.

Organism:: Homo sapiens

Source name:: D458

Platform:: GPL24676
Series:: GSE240830 GSE240985

Download data: BW, NARROWPEAK

Sample

Accession:: GSM7710236

ID:: 307710236

SRA Run Selector

Select item 3077101018.

D283 T21 rep B, pooled CRISPRi

Organism:: Homo sapiens

Source name:: D283

Platform:: GPL24676
Series:: GSE240823 GSE240985

Sample

Accession:: GSM7710101

ID:: 307710101

SRA Run Selector

Select item 3077101009.

D283 T21 rep A, pooled CRISPRi

Organism:: Homo sapiens

Source name:: D283

Platform:: GPL24676
Series:: GSE240823 GSE240985

Sample

Accession:: GSM7710100

ID:: 307710100

SRA Run Selector

Select item 30771009910.

D283 T0 rep B, pooled CRISPRi

Organism:: Homo sapiens

Source name:: D283

Platform:: GPL24676
Series:: GSE240823 GSE240985

Sample

Accession:: GSM7710099

ID:: 307710099

SRA Run Selector

Select item 30771009811.

D283 T0 rep A, pooled CRISPRi

Organism:: Homo sapiens

Source name:: D283

Platform:: GPL24676
Series:: GSE240823 GSE240985

Sample

Accession:: GSM7710098

ID:: 307710098

SRA Run Selector

Select item 30771009712.

D458 T21 rep B, pooled CRISPRi

Organism:: Homo sapiens

Source name:: D458

Platform:: GPL24676
Series:: GSE240823 GSE240985

Sample

Accession:: GSM7710097

ID:: 307710097

SRA Run Selector

Select item 30771009613.

D458 T21 rep A, pooled CRISPRi

Organism:: Homo sapiens

Source name:: D458

Platform:: GPL24676
Series:: GSE240823 GSE240985

Sample

Accession:: GSM7710096

ID:: 307710096

SRA Run Selector

Select item 30771009514.

D458 T0 rep B, pooled CRISPRi

Organism:: Homo sapiens

Source name:: D458

Platform:: GPL24676
Series:: GSE240823 GSE240985

Sample

Accession:: GSM7710095

ID:: 307710095

SRA Run Selector

Select item 30771009415.

D458 T0 rep A, pooled CRISPRi

Organism:: Homo sapiens

Source name:: D458

Platform:: GPL24676
Series:: GSE240823 GSE240985

Sample

Accession:: GSM7710094

ID:: 307710094

SRA Run Selector

Select item 30769765216.

RCMB56-pdx, SHH, Hi-C

Organism:: Homo sapiens

Source name:: RCMB56

Platform:: GPL24676
Series:: GSE240410 GSE240985

Download data: HIC, TXT

Sample

Accession:: GSM7697652

ID:: 307697652

SRA Run Selector

Select item 30769765117.

Organism:: Homo sapiens

Source name:: D458

Platform:: GPL24676
Series:: GSE240410 GSE240985

Download data: HIC, TXT

Sample

Accession:: GSM7697651

ID:: 307697651

SRA Run Selector

Select item 30769765018.

MB288, G3b, Hi-C

Organism:: Homo sapiens

Source name:: medulloblastoma

Platform:: GPL24676
Series:: GSE240410 GSE240985

Download data: HIC, TXT

Sample

Accession:: GSM7697650

ID:: 307697650

SRA Run Selector

Select item 30769764919.

MB277, G3b, Hi-C

Organism:: Homo sapiens

Source name:: medulloblastoma

Platform:: GPL24676
Series:: GSE240410 GSE240985

Download data: HIC, TXT

Sample

Accession:: GSM7697649

ID:: 307697649

SRA Run Selector

Select item 30769764820.

MB275, SHHa, Hi-C

Organism:: Homo sapiens

Source name:: medulloblastoma

Platform:: GPL24676
Series:: GSE240410 GSE240985

Download data: HIC, TXT

Sample

Accession:: GSM7697648

ID:: 307697648

SRA Run Selector

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GSE240985[Accession] (57)
GEO DataSets
zinc finger protein 280D isoform 3 [Homo sapiens]
zinc finger protein 280D isoform 3 [Homo sapiens]
gi|50811875|ref|NP_001002844.1|

Protein
Homo sapiens tryptophan rich basic protein (WRB), mRNA
Homo sapiens tryptophan rich basic protein (WRB), mRNA
gi|208879447|ref|NM_004627.3|

Nucleotide

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