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Items: 6

1.

Single nucleus ATAC-seq datasets for "Temporally Specific Gene Expression and Chromatin Remodeling Programs Regulate a Conserved Pdyn Enhancer"

(Submitter supplied) This dataset contains single nucleus Assay for Transposase-Accessible Chromatin (ATAC) sequencing results from rat nucleus accumbens tissue. Rats received repeated cocaine injections (20mg/kg, intraperitoneal injection), or saline injections as a control. Single-nucleus ATAC-seq was carried out with FACS-sorted nuclei using the 10X Genomics Chromium single cell sequencing platform using the Chromium Next GEM Single Cell ATAC Kit v2.
Organism:
Rattus norvegicus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL20084
4 Samples
Download data: BED, MTX, TSV
Series
Accession:
GSE233754
ID:
200233754

PubMed Full text in PMC Similar studies

2.

Illumina NextSeq 500 (Rattus norvegicus)

Organism:
Rattus norvegicus
313 Series
6438 Samples
Download data
Platform
Accession:
GPL20084
ID:
100020084

3.

Female_Cocaine_1

Organism:
Rattus norvegicus
Source name:
Sprague-Dawley
Platform:
GPL20084
Series:
GSE233754
Download data: BED, MTX, TSV
Sample
Accession:
GSM7434183
ID:
307434183

SRA Run Selector

4.

Male_Cocaine_1

Organism:
Rattus norvegicus
Source name:
Sprague-Dawley
Platform:
GPL20084
Series:
GSE233754
Download data: BED, MTX, TSV
Sample
Accession:
GSM7434182
ID:
307434182

SRA Run Selector

5.

Female_Saline_1

Organism:
Rattus norvegicus
Source name:
Sprague-Dawley
Platform:
GPL20084
Series:
GSE233754
Download data: BED, MTX, TSV
Sample
Accession:
GSM7434181
ID:
307434181

SRA Run Selector

6.

Male_Saline_1

Organism:
Rattus norvegicus
Source name:
Sprague-Dawley
Platform:
GPL20084
Series:
GSE233754
Download data: BED, MTX, TSV
Sample
Accession:
GSM7434180
ID:
307434180

SRA Run Selector

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db=gds|term=GSE233754[Accession]|query=1|qty=2|blobid=MCID_66e7e54bb3438a057633dad8|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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