GSE186667[Accession] - GEO DataSets

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Items: 16

Select item 2001866671.

Smarcb1 is indispensable for the nervous system development and its loss results in a deregulation of esBAF binding [ChIP-seq]

(Submitter supplied) Using ChIP-seq technology, we aimed to provide insight into the consequences of the knockdown of Smarcb1, an essential esBAF subunit, for the binding of the esBAF complex (Smarca4), the PRC2 complex (Ezh2) as well as for histone marks H3K27me3, H3K27ac and H3K4me3. We show that Smarcb1 knockdown results in the change of BAF complex binding in both directions: decreased binding (potentially by loss of function) as well as increased binding (potentially by retargeting). more...

Organism:: Mus musculus

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL19057
14 Samples

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Series

Accession:: GSE186667

ID:: 200186667

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000190572.

Illumina NextSeq 500 (Mus musculus)

Organism:: Mus musculus

10267 Series
295547 Samples

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Platform

Accession:: GPL19057

ID:: 100019057

Select item 3056587783.

ChIP-seq Smarca4 (kd)

Organism:: Mus musculus

Source name:: Embryonic Stem Cells

Platform:: GPL19057
Series:: GSE186667 GSE186669

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Sample

Accession:: GSM5658778

ID:: 305658778

SRA Run Selector

Select item 3056587774.

ChIP-seq Smarca4 (ctrl)

Organism:: Mus musculus

Source name:: Embryonic Stem Cells

Platform:: GPL19057
Series:: GSE186667 GSE186669

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Sample

Accession:: GSM5658777

ID:: 305658777

SRA Run Selector

Select item 3056587765.

ChIP-seq H3K4me3 (kd)

Organism:: Mus musculus

Source name:: Embryonic Stem Cells

Platform:: GPL19057
Series:: GSE186667 GSE186669

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Sample

Accession:: GSM5658776

ID:: 305658776

SRA Run Selector

Select item 3056587756.

ChIP-seq H3K4me3 (ctrl)

Organism:: Mus musculus

Source name:: Embryonic Stem Cells

Platform:: GPL19057
Series:: GSE186667 GSE186669

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Sample

Accession:: GSM5658775

ID:: 305658775

SRA Run Selector

Select item 3056587747.

ChIP-seq H3K27me3 (kd)

Organism:: Mus musculus

Source name:: Embryonic Stem Cells

Platform:: GPL19057
Series:: GSE186667 GSE186669

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Sample

Accession:: GSM5658774

ID:: 305658774

SRA Run Selector

Select item 3056587738.

ChIP-seq H3K27me3 (ctrl)

Organism:: Mus musculus

Source name:: Embryonic Stem Cells

Platform:: GPL19057
Series:: GSE186667 GSE186669

Download data: BED

Sample

Accession:: GSM5658773

ID:: 305658773

SRA Run Selector

Select item 3056587729.

ChIP-seq H3K27ac (kd)

Organism:: Mus musculus

Source name:: Embryonic Stem Cells

Platform:: GPL19057
Series:: GSE186667 GSE186669

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Sample

Accession:: GSM5658772

ID:: 305658772

SRA Run Selector

Select item 30565877110.

ChIP-seq H3K27ac (ctrl)

Organism:: Mus musculus

Source name:: Embryonic Stem Cells

Platform:: GPL19057
Series:: GSE186667 GSE186669

Download data: BED

Sample

Accession:: GSM5658771

ID:: 305658771

SRA Run Selector

Select item 30565877011.

ChIP-seq Ezh2 (kd)

Organism:: Mus musculus

Source name:: Embryonic Stem Cells

Platform:: GPL19057
Series:: GSE186667 GSE186669

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Sample

Accession:: GSM5658770

ID:: 305658770

SRA Run Selector

Select item 30565876912.

ChIP-seq Ezh2 (ctrl)

Organism:: Mus musculus

Source name:: Embryonic Stem Cells

Platform:: GPL19057
Series:: GSE186667 GSE186669

Download data: BED

Sample

Accession:: GSM5658769

ID:: 305658769

SRA Run Selector

Select item 30565876813.

ChIP-seq Input (Smarca4, H3K27me3) (kd)

Organism:: Mus musculus

Source name:: Embryonic Stem Cells

Platform:: GPL19057
Series:: GSE186667 GSE186669

Download data

Sample

Accession:: GSM5658768

ID:: 305658768

SRA Run Selector

Select item 30565876714.

ChIP-seq Input (Smarca4, H3K27me3) (ctrl)

Organism:: Mus musculus

Source name:: Embryonic Stem Cells

Platform:: GPL19057
Series:: GSE186667 GSE186669

Download data

Sample

Accession:: GSM5658767

ID:: 305658767

SRA Run Selector

Select item 30565876615.

ChIP-seq Input (Ezh2, H3K4me3, H3K27ac) (kd)

Organism:: Mus musculus

Source name:: Embryonic Stem Cells

Platform:: GPL19057
Series:: GSE186667 GSE186669

Download data

Sample

Accession:: GSM5658766

ID:: 305658766

SRA Run Selector

Select item 30565876516.

ChIP-seq Input (Ezh2, H3K4me3, H3K27ac) (ctrl)

Organism:: Mus musculus

Source name:: Embryonic Stem Cells

Platform:: GPL19057
Series:: GSE186667 GSE186669

Download data

Sample

Accession:: GSM5658765

ID:: 305658765

SRA Run Selector

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GSE186667[Accession] (16)
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