GSE150633[Accession] - GEO DataSets - NCBI

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Differential contribution to gene expression prediction of histone modifications at enhancers or promoters

(Submitter supplied) Whereas the ChIP-seq signal of histone modifications at promoters is reported to be a good predictor of gene expression in different cellular contexts, this question has been poorly addressed for enhancers. Embryonic stem cells (ESCs) ―where the full spectrum of active and repressed (poised) enhancers can be identified― are the appropriate model system to tackle this problem. Since many poised enhancers in ESCs switch towards an active state during differentiation, predictive models can be learnt from poised enhancers throughout differentiation. more...

Organism:: Mus musculus

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL13112
12 Samples

Download data: BEDGRAPH

Series

Accession:: GSE150633

ID:: 200150633

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000131122.

Illumina HiSeq 2000 (Mus musculus)

Organism:: Mus musculus

8349 Series
188710 Samples

Platform

Accession:: GPL13112

ID:: 100013112

Select item 3045551603.

Organism:: Mus musculus

Source name:: Input_mESC

Platform:: GPL13112
Series:: GSE150633

Download data: BEDGRAPH

Sample

Accession:: GSM4555160

ID:: 304555160

SRA Run Selector

Select item 3045551594.

Organism:: Mus musculus

Source name:: H4K20me3_mESC

Platform:: GPL13112
Series:: GSE150633

Download data: BEDGRAPH

Sample

Accession:: GSM4555159

ID:: 304555159

SRA Run Selector

Select item 3045551585.

Organism:: Mus musculus

Source name:: H3_mESC

Platform:: GPL13112
Series:: GSE150633

Download data: BEDGRAPH

Sample

Accession:: GSM4555158

ID:: 304555158

SRA Run Selector

Select item 3045551576.

Organism:: Mus musculus

Source name:: H3K79me2_mESC

Platform:: GPL13112
Series:: GSE150633

Download data: BEDGRAPH

Sample

Accession:: GSM4555157

ID:: 304555157

SRA Run Selector

Select item 3045551567.

Organism:: Mus musculus

Source name:: H3K4me3_mESC

Platform:: GPL13112
Series:: GSE150633

Download data: BEDGRAPH

Sample

Accession:: GSM4555156

ID:: 304555156

SRA Run Selector

Select item 3045551558.

Organism:: Mus musculus

Source name:: H3K4me1_mESC

Platform:: GPL13112
Series:: GSE150633

Download data: BEDGRAPH

Sample

Accession:: GSM4555155

ID:: 304555155

SRA Run Selector

Select item 3045551549.

Organism:: Mus musculus

Source name:: H3K36me3_mESC

Platform:: GPL13112
Series:: GSE150633

Download data: BEDGRAPH

Sample

Accession:: GSM4555154

ID:: 304555154

SRA Run Selector

Select item 30455515310.

Organism:: Mus musculus

Source name:: H3K27me3_mESC

Platform:: GPL13112
Series:: GSE150633

Download data: BEDGRAPH

Sample

Accession:: GSM4555153

ID:: 304555153

SRA Run Selector

Select item 30455515211.

Organism:: Mus musculus

Source name:: H3K27me2_mESC

Platform:: GPL13112
Series:: GSE150633

Download data: BEDGRAPH

Sample

Accession:: GSM4555152

ID:: 304555152

SRA Run Selector

Select item 30455515112.

Organism:: Mus musculus

Source name:: H3K27me1_mESC

Platform:: GPL13112
Series:: GSE150633

Download data: BEDGRAPH

Sample

Accession:: GSM4555151

ID:: 304555151

SRA Run Selector

Select item 30455515013.

Organism:: Mus musculus

Source name:: H3K27ac_mESC

Platform:: GPL13112
Series:: GSE150633

Download data: BEDGRAPH

Sample

Accession:: GSM4555150

ID:: 304555150

SRA Run Selector

Select item 30455514914.

Organism:: Mus musculus

Source name:: H2Bub1_mESC

Platform:: GPL13112
Series:: GSE150633

Download data: BEDGRAPH

Sample

Accession:: GSM4555149

ID:: 304555149

SRA Run Selector

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