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Items: 20

1.

ChIP-seq analysis of wild-type and PML KO mESCs

(Submitter supplied) Promyelocytic leukemia (PML) body is a phase-separated nuclear structure composed of various proteins including several chromatin regulators, and physically associates with chromatin, implying its crucial roles for particular genome functions. To investigate roles of PML bodies in transcriptional regulation, we conducted ChIP-seq analysis for histone modifications, including H3K4me3, H3K27ac, H3K27me3, and H3K9ac with wild-type and PML knockout mESCs.
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL21493
18 Samples
Download data: BW
Series
Accession:
GSE135562
ID:
200135562

PubMed Similar studies SRA Run Selector

2.

Illumina HiSeq 3000 (Mus musculus)

Organism:
Mus musculus
1134 Series
42477 Samples
Download data
Platform
Accession:
GPL21493
ID:
100021493

3.

ESCs, PmlKO_input

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017197
ID:
304017197

SRA Run Selector

4.

ESCs, WT_input

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017196
ID:
304017196

SRA Run Selector

5.

ESCs, PmlKO_ChIP_H3K9me3_rep2

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017195
ID:
304017195

SRA Run Selector

6.

ESCs, PmlKO_ChIP_H3K9me3_rep1

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017194
ID:
304017194

SRA Run Selector

7.

ESCs, WT_ChIP_H3K9me3_rep2

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017193
ID:
304017193

SRA Run Selector

8.

ESCs, WT_ChIP_H3K9me3_rep1

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017192
ID:
304017192

SRA Run Selector

9.

ESCs, PmlKO_ChIP_H3K27me3_rep2

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017191
ID:
304017191

SRA Run Selector

10.

ESCs, PmlKO_ChIP_H3K27me3_rep1

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017190
ID:
304017190

SRA Run Selector

11.

ESCs, WT_ChIP_H3K27me3_rep2

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017189
ID:
304017189

SRA Run Selector

12.

ESCs, WT_ChIP_H3K27me3_rep1

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017188
ID:
304017188

SRA Run Selector

13.

ESCs, PmlKO_ChIP_H3K4me3_rep2

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017187
ID:
304017187

SRA Run Selector

14.

ESCs, PmlKO_ChIP_H3K4me3_rep1

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017186
ID:
304017186

SRA Run Selector

15.

ESCs, WT_ChIP_H3K4me3_rep2

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017185
ID:
304017185

SRA Run Selector

16.

ESCs, WT_ChIP_H3K4me3_rep1

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017184
ID:
304017184

SRA Run Selector

17.

ESCs, PmlKO_ChIP_H3K27ac_rep2

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017183
ID:
304017183

SRA Run Selector

18.

ESCs, PmlKO_ChIP_H3K27ac_rep1

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017182
ID:
304017182

SRA Run Selector

19.

ESCs, WT_ChIP_H3K27ac_rep2

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017181
ID:
304017181

SRA Run Selector

20.

ESCs, WT_ChIP_H3K27ac_rep1

Organism:
Mus musculus
Source name:
embryonic stem cell
Platform:
GPL21493
Series:
GSE135562 GSE135563
Download data
Sample
Accession:
GSM4017180
ID:
304017180

SRA Run Selector

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