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Items: 16

1.

A TRIM71 binding long noncoding RNA Trincr1 represses FGF/ERK signaling in embryonic stem cells

(Submitter supplied) Long noncoding RNAs (lncRNAs) have emerged as important components of gene regulatory network in embryonic stem cells (ESCs). However, the function and molecular mechanism of lncRNAs are still largely unknown. Here we identified Trincr1 (TRIM71 interacting long noncoding RNA 1) lncRNA that regulates the FGF/ERK signaling and self-renewal of ESCs. Trincr1 is exported by THOC complex to cytoplasm where it binds and represses TRIM71, leading to the downregulation of SHCBP1 protein. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL13112
14 Samples
Download data: TXT
Series
Accession:
GSE125458
ID:
200125458

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Mus musculus)

Organism:
Mus musculus
8349 Series
188710 Samples
Download data
Platform
Accession:
GPL13112
ID:
100013112

3.

IP_Trim71_rep2

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE125458
Download data
Sample
Accession:
GSM3574400
ID:
303574400

SRA Run Selector

4.

IP_Trim71_rep1

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE125458
Download data
Sample
Accession:
GSM3574399
ID:
303574399

SRA Run Selector

5.

IP_empty_rep2

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE125458
Download data
Sample
Accession:
GSM3574398
ID:
303574398

SRA Run Selector

6.

IP_empty_rep1

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE125458
Download data
Sample
Accession:
GSM3574397
ID:
303574397

SRA Run Selector

7.

Input_rep2

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE125458
Download data
Sample
Accession:
GSM3574396
ID:
303574396

SRA Run Selector

8.

Input_rep1

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE125458
Download data
Sample
Accession:
GSM3574395
ID:
303574395

SRA Run Selector

9.

Trincr1-ko_PDL_rep2

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE125458
Download data
Sample
Accession:
GSM3574394
ID:
303574394

SRA Run Selector

10.

Trincr1-ko_PDL_rep1

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE125458
Download data
Sample
Accession:
GSM3574393
ID:
303574393

SRA Run Selector

11.

WT_PDL_rep2

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE125458
Download data
Sample
Accession:
GSM3574392
ID:
303574392

SRA Run Selector

12.

WT_PDL_rep1

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE125458
Download data
Sample
Accession:
GSM3574391
ID:
303574391

SRA Run Selector

13.

Trincr1-ko_2iL_rep2

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE125458
Download data
Sample
Accession:
GSM3574390
ID:
303574390

SRA Run Selector

14.

Trincr1-ko_2iL_rep1

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE125458
Download data
Sample
Accession:
GSM3574389
ID:
303574389

SRA Run Selector

15.

WT_2iL_rep2

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE125458
Download data
Sample
Accession:
GSM3574388
ID:
303574388

SRA Run Selector

16.

WT_2iL_rep1

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE125458
Download data
Sample
Accession:
GSM3574387
ID:
303574387

SRA Run Selector

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