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Items: 8

1.

Integrative analysis identifies lincRNAs up- and downstream of neuroblastoma driver genes (ALK)

(Submitter supplied) Long intergenic non-coding RNAs (lincRNAs) are emerging as integral components of signaling pathways in various cancer types. In neuroblastoma, only a handful of lincRNAs are known as upstream regulators or downstream effectors of oncogenes. Here, we exploit RNA sequencing data of primary neuroblastoma tumors, neuroblast precursor cells, neuroblastoma cell lines and various cellular perturbation model systems to define the neuroblastoma lincRNome and map lincRNAs up- and downstream of neuroblastoma driver genes MYCN, ALK and PHOX2B. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing
Platform:
GPL18573
6 Samples
Download data: TXT
2.

Illumina NextSeq 500 (Homo sapiens)

Platform
Accession:
GPL18573
ID:
100018573
3.

CLB-GA-ctrl_rep3

Organism:
Homo sapiens
Source name:
neuroblastoma
Platform:
GPL18573
Series:
GSE124450
Download data: TXT
Sample
Accession:
GSM3533479
ID:
303533479
4.

CLB-GA-ctrl_rep2

Organism:
Homo sapiens
Source name:
neuroblastoma
Platform:
GPL18573
Series:
GSE124450
Download data: TXT
Sample
Accession:
GSM3533478
ID:
303533478
5.

CLB-GA-ctrl_rep1

Organism:
Homo sapiens
Source name:
neuroblastoma
Platform:
GPL18573
Series:
GSE124450
Download data: TXT
Sample
Accession:
GSM3533477
ID:
303533477
6.

CLB-GA-Crizotinib_rep3

Organism:
Homo sapiens
Source name:
neuroblastoma
Platform:
GPL18573
Series:
GSE124450
Download data: TXT
Sample
Accession:
GSM3533476
ID:
303533476
7.

CLB-GA-Crizotinib_rep2

Organism:
Homo sapiens
Source name:
neuroblastoma
Platform:
GPL18573
Series:
GSE124450
Download data: TXT
Sample
Accession:
GSM3533475
ID:
303533475
8.

CLB-GA-Crizotinib_rep1

Organism:
Homo sapiens
Source name:
neuroblastoma
Platform:
GPL18573
Series:
GSE124450
Download data: TXT
Sample
Accession:
GSM3533474
ID:
303533474
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Supplemental Content

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