GSE111733[Accession] - GEO DataSets - NCBI

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Items: 11

Select item 2001117331.

Continuous-trait probabilistic model for comparing multi-species functional genomic data

(Submitter supplied) We developed a probabilistic method to simultaneously infer genome-wide heterogeneous evolutionary states. We applied the proposed method to analyze a cross-species DNA replication timing (RT) dataset from the same cell type in five primate species. We demonstrated that the proposed model enables discovery of genomic regions with distinct evolutionary patterns of RT.

Organism:: Nomascus leucogenys; Chlorocebus aethiops; Homo sapiens; Pan troglodytes; Pongo pygmaeus

Type:: Other

5 related Platforms
5 Samples

Download data: BW

Series

Accession:: GSE111733

ID:: 200111733

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000247282.

Illumina HiSeq 2500 (Pongo pygmaeus)

Organism:: Pongo pygmaeus

1 Series
1 Sample

Platform

Accession:: GPL24728

ID:: 100024728

Select item 1000247273.

Illumina HiSeq 2500 (Nomascus leucogenys)

Organism:: Nomascus leucogenys

5 Series
32 Samples

Platform

Accession:: GPL24727

ID:: 100024727

Select item 1000229034.

Illumina HiSeq 2500 (Chlorocebus aethiops)

Organism:: Chlorocebus aethiops

4 Series
49 Samples

Platform

Accession:: GPL22903

ID:: 100022903

Select item 1000191485.

Illumina HiSeq 2500 (Pan troglodytes)

Organism:: Pan troglodytes

28 Series
1892 Samples

Platform

Accession:: GPL19148

ID:: 100019148

Select item 1000167916.

Illumina HiSeq 2500 (Homo sapiens)

Organism:: Homo sapiens

12192 Series
349329 Samples

Platform

Accession:: GPL16791

ID:: 100016791

Select item 3030388507.

Gibbon_RepliSeq

Organism:: Nomascus leucogenys

Source name:: Gibbon lymphocyte

Platform:: GPL24727
Series:: GSE111733

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Sample

Accession:: GSM3038850

ID:: 303038850

SRA Run Selector

Select item 3030388478.

GM12878_RepliSeq

Organism:: Homo sapiens

Source name:: GM12878 B-lymphocyte

Platform:: GPL16791
Series:: GSE111733

Download data: BW

Sample

Accession:: GSM3038847

ID:: 303038847

SRA Run Selector

Select item 3030388499.

Orangutan_RepliSeq

Organism:: Pongo pygmaeus

Source name:: Orangutan lymphocyte

Platform:: GPL24728
Series:: GSE111733

Download data: BW

Sample

Accession:: GSM3038849

ID:: 303038849

SRA Run Selector

Select item 30303884810.

Chimpanzee_RepliSeq

Organism:: Pan troglodytes

Source name:: Chimpanzee lymphocyte

Platform:: GPL19148
Series:: GSE111733

Download data: BW

Sample

Accession:: GSM3038848

ID:: 303038848

SRA Run Selector

Select item 30303885111.

GreenMonkey_RepliSeq

Organism:: Chlorocebus aethiops

Source name:: Green Monkey lymphocyte

Platform:: GPL22903
Series:: GSE111733

Download data: BW

Sample

Accession:: GSM3038851

ID:: 303038851

SRA Run Selector

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GSE111733[Accession] (11)
GEO DataSets
txid939324[Organism] (1)
SRA
SRX15577277 (1)
SRA
Plant sample from Brownea latifolia
Plant sample from Brownea latifolia

biosample
Homo sapiens SNAP associated protein (SNAPIN), transcript variant 1, mRNA
Homo sapiens SNAP associated protein (SNAPIN), transcript variant 1, mRNA
gi|1653961118|ref|NM_012437.6|

Nucleotide

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