GSE111085[Accession] - GEO DataSets - NCBI

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Distinct Transcriptomic and Exomic Abnormalities within Myelodysplastic Syndrome Marrow Cells

(Submitter supplied) Prior studies using DNA microarray platforms have shown alterations of gene expression profiles (GEPs) of marrow cells in myelodysplastic syndromes (MDS). Using the increased sensitivity and accuracy of high-throughput RNA sequencing (RNA-Seq) for detecting and quantifying mRNA transcripts, our study has demonstrated novel significant differences in GEPs between MDS and normal CD34+ marrow cells with 41 genes identified as disease classifiers. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL11154
67 Samples

Download data: TXT

Series

Accession:: GSE111085

ID:: 200111085

PubMed Full text in PMC Similar studies Analyze with GEO2R SRA Run Selector

Select item 1000111542.

Illumina HiSeq 2000 (Homo sapiens)

Organism:: Homo sapiens

10553 Series
183669 Samples

Platform

Accession:: GPL11154

ID:: 100011154

Select item 3030219283.

MDS99_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021928

ID:: 303021928

SRA Run Selector

Select item 3030219274.

MDS94_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021927

ID:: 303021927

SRA Run Selector

Select item 3030219265.

MDS98_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021926

ID:: 303021926

SRA Run Selector

Select item 3030219256.

MDS96_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021925

ID:: 303021925

SRA Run Selector

Select item 3030219247.

MDS97_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021924

ID:: 303021924

SRA Run Selector

Select item 3030219238.

MDS107_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021923

ID:: 303021923

SRA Run Selector

Select item 3030219229.

MDS92_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021922

ID:: 303021922

SRA Run Selector

Select item 30302192110.

MDS78_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021921

ID:: 303021921

SRA Run Selector

Select item 30302192011.

MDS121_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021920

ID:: 303021920

SRA Run Selector

Select item 30302191912.

MDS125_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021919

ID:: 303021919

SRA Run Selector

Select item 30302191813.

MDSBM791_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021918

ID:: 303021918

SRA Run Selector

Select item 30302191714.

MDS1278_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021917

ID:: 303021917

SRA Run Selector

Select item 30302191615.

MDS1280_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021916

ID:: 303021916

SRA Run Selector

Select item 30302191516.

MDSBM862_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021915

ID:: 303021915

SRA Run Selector

Select item 30302191417.

MDSBM800_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021914

ID:: 303021914

SRA Run Selector

Select item 30302191318.

MDSBM802_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021913

ID:: 303021913

SRA Run Selector

Select item 30302191219.

MDS1274_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021912

ID:: 303021912

SRA Run Selector

Select item 30302191120.

MDS1277_Normal_RNA-seq

Organism:: Homo sapiens

Source name:: Hematopoietic stem cells

Platform:: GPL11154
Series:: GSE111085

Sample

Accession:: GSM3021911

ID:: 303021911

SRA Run Selector

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