GPL6988[RGSE] - GEO DataSets

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Items: 4

Select item 2000350231.

Differential allelic expression in normal breast tissue

(Submitter supplied) Most loci contributing to breast cancer susceptibility identified by the recent genome-wide association studies (GWAS) are predicted to have a regulatory function. Additionally, the early phases of the GWAS studies have generated long lists of possible candidates that need to be prioritised for follow-up studies. Integration of allelic expression mapping and disease association data should enable the identification of those GWAS hits with higher cis-regulatory potential. more...

Organism:: Homo sapiens

Type:: Other

Platform:: GPL6988
130 Samples

Download data: TXT

Series

Accession:: GSE35023

ID:: 200035023

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000248902.

Genome-wide copy number variation in human metastatic melanoma cell lines

(Submitter supplied) Illumina HumanExon510S-DUO bead arrays (Illumina Inc) were performed according to the manufacturer's protocol.

Organism:: Homo sapiens

Type:: Genome variation profiling by SNP array; SNP genotyping by SNP array

Platform:: GPL6988
4 Samples

Download data: TXT

Series

Accession:: GSE24890

ID:: 200024890

PubMed Full text in PMC Similar studies

Select item 2000242773.

Human Variation Panel: Gene Expression and Genotype

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: SNP genotyping by SNP array; Expression profiling by array; Genome variation profiling by SNP array

4 related Platforms
862 Samples

Download data: CEL

Series

Accession:: GSE24277

ID:: 200024277

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000242454.

Genome-wide SNP array data from Human Variation Panel by Illumina 510S

(Submitter supplied) Radiation therapy is used to treat half of all cancer patients. Response to radiation therapy varies widely among patients. Therefore, we performed a genome-wide association study (GWAS) to identify biomarkers to help predict radiation response using 277 ethnically defined human lymphoblastoid cell lines (LCLs). Basal gene expression levels (Affymetrix) and 1.3 million genome-wide SNP markers (Illumina) were assayed for all 277 human LCLs. more...