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Items: 4

1.

Study on Salt Tolerance Mechanism via Illumina-based RNA-seq in Chrysanthemum Roots

(Submitter supplied) The samples were respectively from three replicates of the salt stress treatment and the control, then we obtained six cDNA libraries. In total, 983,827 transcripts and 469,059 unigenes were constructed. We got a total of 75,070 differentially expressed genes (DEGs), of which 48,965 were up-regulated and the other 26,105 were down regulated under the salt treatment.
Organism:
Chrysanthemum x morifolium
Type:
Expression profiling by high throughput sequencing
Platform:
GPL23798
6 Samples
Download data: FASTA, TXT
Series
Accession:
GSE114752
ID:
200114752

SRA Run Selector

2.

Study on Low temperature Mechanism via SMRT-based RNA-seq in Chrysanthemum leaves

(Submitter supplied) The mixed sample was obtained from the salt stress treatment and the control, then we obtained one cDNA library. In total, 3,717,516 subreads and 141,445 Consensus reads were constructed.
Organism:
Chrysanthemum x morifolium
Type:
Expression profiling by high throughput sequencing
Platform:
GPL23798
6 Samples
Download data: FASTA, TXT
Series
Accession:
GSE117262
ID:
200117262

SRA Run Selector

3.

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and transgenic DgWRKY5 Chrysanthemum Transcriptomes

(Submitter supplied) We generated 12 Gb of high-quality sequencing data (~6 Gb per sample) to clarify the molecular mechanism of salt tolerance between wild tipe and transgenic DgWRKY5 chrysanthemum under normal condition. A total of 1078 differentially expressed genes (DEGs) (593 up-regulated and 485 down-regulated) were identified between CK and DgWRKY5, including genes encoding transcription factors and protein kinases. more...
Organism:
Chrysanthemum x morifolium
Type:
Expression profiling by high throughput sequencing
Platform:
GPL23798
2 Samples
Download data: FASTA, XLS
Series
Accession:
GSE101599
ID:
200101599

SRA Run Selector

4.

Transcriptome analysis of chrysanthemum (Dendranthema grandiflorum) in response to low temperature stress

(Submitter supplied) We used the RNA-Seq platform to perform a de novo transcriptome assembly to analyze chrysanthemum (Dendranthema grandiflorum) transcription response to low temperature. Using Illumina sequencing technology, a total of 86,444,237 high-quality clean reads and 93,837 unigenes were generated from four libraries: T01, controls; T02, 4 ℃ cold acclimation (CA) for 24 h; T03, -4 ℃ freezing treatments for 4 h with prior CA; and T04, -4 ℃ freezing treatments for 4 h without prior CA. more...
Organism:
Chrysanthemum x morifolium
Type:
Expression profiling by high throughput sequencing
Platform:
GPL23798
4 Samples
Download data: FA, TXT
Series
Accession:
GSE102413
ID:
200102413

SRA Run Selector

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