Conanthus flavescens - GEO DataSets

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Select item 2001839111.

Expression data of Oral squamous cell carcinoma (OSCC) cell lines CAL27, SCC4 and SCC25 treated with oral commensals

(Submitter supplied) Oral bacterial species Streptococcus mitis, Neisseria flavescens, and Haemophilus parainfluenzae, and Porphyromonas gingivalis were each co-cultured with the OSCC cell lines CAL27, SCC4 and SCC25 individually. Total RNA was extracted from the cell lines, followed by gene expression profiling with microarray analysis.

Organism:: Homo sapiens

Type:: Expression profiling by array

Platform:: GPL23159
48 Samples

Download data: CEL, CHP

Series

Accession:: GSE183911

ID:: 200183911

Analyze with GEO2R

Select item 2000736152.

Female Reproductive Impacts of Dietary Methylmercury in Yellow Perch (Perca flavescens) and Zebrafish (Danio rerio)

(Submitter supplied) This study sought to evaluate the effects of dietary MeHg exposure on adult female yellow perch (Perca flavescens) and zebrafish (Danio rerio) reproduction by relating controlled exposures with subsequent reproductive effects. Yellow perch were used in the study for their socioeconomic and ecological importance within the Great Lakes basin, and the use of zebrafish allowed for a detailed analysis of the molecular effects of MeHg. more...

Organism:: Danio rerio

Type:: Expression profiling by high throughput sequencing

Platform:: GPL14875
12 Samples

Download data: DIFF, FPKM_TRACKING, PDF, TXT

Series

Accession:: GSE73615

ID:: 200073615

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000767233.

Transcriptional response of yellow perch to changes in ambient metal concentrations - a reciprocal field transplantation experiment

(Submitter supplied) Our main objectives wereto investigate the molecular mechanisms involved in metal toxicity and detoxification in the field using juvenile yellow perch subjected to differents levels of this metal exposure. Recent local adaptation to pollution has been evidenced in several organisms inhabiting environments heavily contaminated by metals. Nevertheless, the molecular mechanisms underlying adaptation to high metal concentrations are poorly understood, especially in fishes. more...

Organism:: Perca flavescens

Type:: Expression profiling by array

Platform:: GPL17732
64 Samples

Download data: XLSX

Series

Accession:: GSE76723

ID:: 200076723

Analyze with GEO2R

Select item 2000509754.

How does exposure of yellow perch (Perca flavescens) to nickel and cadmium affect the transcriptome-results from a 1000 candidate-gene microarray

(Submitter supplied) Our main objectives were: 1) to identify transcriptional signatures specific to the exposure to two metals: Ni and Cd; 2) to investigate the mechanisms of toxicity for these two metals; and 3) to develop a predictive tool to identify the sublethal effects of Ni and Cd contaminants in fish sampled from natural environments. The molecular mechanisms underlying nickel (Ni) and cadmium (Cd) toxicity and their specific effects on fish are poorly understood. more...