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Items: 1 to 20 of 79

  • The following term was not found in GEO DataSets: cassioides.
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1.

Transcriptome of Acacia cornigera extrafloral nectaries

(Submitter supplied) Nectaries are the glands responsible for nectar secretion. In the tree Acacia cornigera, extrafloral nectaries produce nectar primarily consumed by mutualistic ant colonies. To understand the genetic programming underlying nectar production, and in particular the connection of the jasmonic acid pathway with the mutualistic ants, extrafloral nectaries tissue was collected at ten time points and conditions, with RNA being isolated and subjected to Illumina RNA-seq analysis.
Organism:
Vachellia cornigera
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24954
24 Samples
Download data: TXT
Series
Accession:
GSE113932
ID:
200113932

SRA Run Selector

2.

Expression data from uterus of SD rat during pre-implantation period.

(Submitter supplied) Contraceptive action of Ormeloxifene(Orm), a non-steroidal anti-implantation agent, is well established, however, the molecular targets and pathways regulated by Orm are still not known . The present study was aimed at identifying the genes and pathways modulated by the Orm treatment in rats during uterine receptivity We used microarrays to detail the global programme of gene expression underlying molecular targets and pathways identified under the influence of Ormeloxifene .
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Platform:
GPL17117
4 Samples
Download data: CEL, CHP
Series
Accession:
GSE57708
ID:
200057708

Analyze with GEO2R

3.

Expression analysis of Acacia koa in response to mechanical stimuli

(Submitter supplied) The genes induced by mechanical stimuli may be also involved in disease resistance and wood formation and development in Acacia koa. If so, mechanically stressed A. koa may be used as a model to study disease resistance and wood formation and development. Microarray analysis was performed to determine expression levels of 4,000 genes related to disease resistance and wood development in Acacia koa in response to mechanical stimuli (touch).
Organism:
Acacia koa
Type:
Expression profiling by array
Platform:
GPL21012
4 Samples
Download data: CALLS, PAIR
Series
Accession:
GSE73889
ID:
200073889

Analyze with GEO2R

4.

Drug Matrix Data - CodeLink Arrays

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Platforms:
GPL5426 GPL5424 GPL5425
12921 Samples
Download data: TXT
Series
Accession:
GSE59927
ID:
200059927

Analyze with GEO2R

5.

Exposure of rat to a variety of toxicants, liver assayed by Codelink microarray

(Submitter supplied) DrugMatrix is a comprehensive rat toxicogenomics database and analysis tool developed to facilitate the integration of toxicogenomics into hazard assessment. Using the whole genome and a diverse set of compounds allows a comprehensive view of most pharmacological and toxicological questions and is applicable to other situations such as disease and development.
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Platforms:
GPL5424 GPL5426 GPL5425
5265 Samples
Download data: TXT
Series
Accession:
GSE59923
ID:
200059923

Analyze with GEO2R

6.

Exposure of rat to a variety of toxicants, heart assayed by CodeLink microarray

(Submitter supplied) DrugMatrix is a comprehensive rat toxicogenomics database and analysis tool developed to facilitate the integration of toxicogenomics into hazard assessment. Using the whole genome and a diverse set of compounds allows a comprehensive view of most pharmacological and toxicological questions and is applicable to other situations such as disease and development.
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Platforms:
GPL5425 GPL5426
2051 Samples
Download data: TXT
Series
Accession:
GSE59905
ID:
200059905

Analyze with GEO2R

7.

Drug Matrix Data - Affymetrix Arrays

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Platform:
GPL1355
5587 Samples
Download data: CEL
Series
Accession:
GSE57822
ID:
200057822

PubMed Full text in PMC Similar studies Analyze with GEO2R

8.

Exposure of rat to a variety of toxicants, heart assayed by Affymetrix microarray

(Submitter supplied) DrugMatrix is a comprehensive rat toxicogenomics database and analysis tool developed to facilitate the integration of toxicogenomics into hazard assessment. Using the whole genome and a diverse set of compounds allows a comprehensive view of most pharmacological and toxicological questions and is applicable to other situations such as disease and development.
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Platform:
GPL1355
862 Samples
Download data: CEL
Series
Accession:
GSE57800
ID:
200057800

PubMed Full text in PMC Similar studies Analyze with GEO2R

9.

Honeys Inhibit Virulence and Biofilm Formation in Enterohaemorrhagic Escherichia coli O157:H7, but Do not Harm Commensal Escherichia coli K-12 Biofilm

(Submitter supplied) Honey has been widely used against bacterial infection for centuries. Previous studies suggested that honeys in high concentrations inhibited bacterial growth due to the presence of anti-microbial compounds, such as methylglyoxal, hydrogen peroxide, and peptides. In this study, we found that three honeys (acacia, clover, and polyfloral) in a low concentration as below as 0.5% (v/v) significantly suppress virulence and biofilm formation in enterohemorrhagic E. more...
Organism:
Escherichia coli
Type:
Expression profiling by array
Platform:
GPL3154
2 Samples
Download data: CEL, CHP
Series
Accession:
GSE28193
ID:
200028193

PubMed Similar studies Analyze with GEO2R

10.

Liver Pharmacology and Xenobiotic Response Repertoire

(Submitter supplied) A definition of RNA expression changes that correlate with liver response programs and an understanding of the similarities and differences in responses to different classes of chemicals would aid in new chemical or drug characterization and add to our understanding of liver biology. We have used a supervised classification approach to systematically mine a large microarray database derived from livers of compound-treated rats. more...
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Platforms:
GPL5425 GPL5424 GPL5426
5312 Samples
Download data
Series
Accession:
GSE8858
ID:
200008858

PubMed Full text in PMC Similar studies Analyze with GEO2R

11.

Tannin resistance strategies of Escherichia coli in anaerobic conditions

(Submitter supplied) Gene expression profiles of Escherichia coli, grown anaerobically, with or without Acacia mearnsii (Black wattle) extract were compared to identify tannin-resistance strategies. The cell envelope stress protein, spy, and the multidrug transporter-encoding mdtABCD, both under the control of the BaeSR two-component regulatory system, were significantly up-regulated in the presence of tannins. BaeSR mutants were more tannin-sensitive than their wild-type counterparts. more...
Organism:
Escherichia coli; Escherichia coli K-12
Type:
Expression profiling by array
Platform:
GPL199
4 Samples
Download data: CEL, CHP
Series
Accession:
GSE9755
ID:
200009755

PubMed Full text in PMC Similar studies Analyze with GEO2R

12.

NimbleGen Acacia koa 4x72K array v1.0

(Submitter supplied) Six 60-bp probes (three replicates/probe) were designed per sequence. 120423_Akoa_expr.ndf 120423_Akoa_expr.ngd Protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.
Organism:
Acacia koa
1 Series
4 Samples
Download data: NDF, NGD
Platform
Accession:
GPL21012
ID:
100021012

13.

uterus control C, biological rep2

Organism:
Rattus norvegicus
Source name:
Sprague Dawley rat uterus (pre-implantation period) treated with vehicle
Platform:
GPL17117
Series:
GSE57708
Download data: CEL, CHP
Sample
Accession:
GSM1387110
ID:
301387110

14.

uterus control C, biological rep1

Organism:
Rattus norvegicus
Source name:
Sprague Dawley rat uterus (pre-implantation period) treated with vehicle
Platform:
GPL17117
Series:
GSE57708
Download data: CEL, CHP
Sample
Accession:
GSM1387109
ID:
301387109

15.

uterus treated T, biological rep2

Organism:
Rattus norvegicus
Source name:
Sprague Dawley rat uterus (pre-implantation period) treated with Orm
Platform:
GPL17117
Series:
GSE57708
Download data: CEL, CHP
Sample
Accession:
GSM1387108
ID:
301387108

16.

uterus treated T, biological rep1

Organism:
Rattus norvegicus
Source name:
Sprague Dawley rat uterus (pre-implantation period) treated with Orm
Platform:
GPL17117
Series:
GSE57708
Download data: CEL, CHP
Sample
Accession:
GSM1387107
ID:
301387107

17.

BP1-4-stressed2

Organism:
Acacia koa
Source name:
Acacia koa
Platform:
GPL21012
Series:
GSE73889
Download data: CALLS, PAIR
Sample
Accession:
GSM1905025
ID:
301905025

18.

BP1-3-stressed1

Organism:
Acacia koa
Source name:
Acacia koa
Platform:
GPL21012
Series:
GSE73889
Download data: CALLS, PAIR
Sample
Accession:
GSM1905024
ID:
301905024

19.

BP1-2-unstressed2

Organism:
Acacia koa
Source name:
Acacia koa
Platform:
GPL21012
Series:
GSE73889
Download data: CALLS, PAIR
Sample
Accession:
GSM1905023
ID:
301905023

20.

BP1-1-unstressed1

Organism:
Acacia koa
Source name:
Acacia koa
Platform:
GPL21012
Series:
GSE73889
Download data: CALLS, PAIR
Sample
Accession:
GSM1905022
ID:
301905022

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db=gds|term=Acacia%20cassioides|query=9|qty=6|blobid=MCID_67353a16b31eac71f54758bb|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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