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Items: 1 to 20 of 57

1.

Transcriptomic analysis of leaves and leaf cells from the medicinal plant Catharanthus roseus

(Submitter supplied) The goal of this study is to investigate differential transcription profiles of leaf material/cells accumulating different levels of alkaloids in the anticancer plant Catharanthus roseus.
Organism:
Catharanthus roseus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL32853 GPL32852
35 Samples
Download data: FASTA, TXT
Series
Accession:
GSE217852
ID:
200217852
2.

Small RNA profiling of aster yellows infected Catharanthus roseus plants

(Submitter supplied) Aster yellows phytoplasma strain Hyd35 (16SrI-B) in micropropagated periwinkle shoots in collection was used to produce infected plants in pots that were separated according to the diverse symptomatology i.e. phyllody and witches’ broom. Small RNA high-throughput sequencing (HTS) was then used to determine the small RNA pattern of these plants. Bioinformatics analysis revealed the presence of expression changes of different miRNA classes and the presence of phytoplasma derived small RNAs. more...
Organism:
Catharanthus roseus
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL18652
9 Samples
Download data: TXT
Series
Accession:
GSE213754
ID:
200213754
3.

PAW-plasma activated water-triggers plant defence responses

(Submitter supplied) Nowadays one of the main challenges is moving towards an eco-sustainable agriculture, able to preserve the food production through a reduced use of pesticides. The current global food sustenance by intensive agriculture mainly based on economic crop monocultures drastically reduces the biodiversity increasing the yield losses due to biotic and abiotic stress. To try to ensure yield stability also enhancing the plant resistance responses to promote an eco-sustainable management of plant diseases, a technology based on plasma activated water (PAW), characterized by the production of reactive oxygen and nitrogen species, was tested. more...
Organism:
Catharanthus roseus
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL18652
6 Samples
Download data: TXT
Series
Accession:
GSE146177
ID:
200146177
4.

Catharanthus Transcriptome and Gene Expression

(Submitter supplied) In this study, we aim to present a global transcriptome analysis of medicinal plant, Catharanthus roseus. We generated about 343 million high-quality reads from three tissues (leaf, root and flower) using Illumina platform. We performed an optimized de novo assembly of the reads and estimated transcript abundance in different tissue samples. The transcriptome dynamics was studied by differential gene expression analyses among tissue samples.
Organism:
Catharanthus roseus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18652
3 Samples
Download data: TXT
Series
Accession:
GSE57326
ID:
200057326
5.

Leaves, pair 3, outdoors, biol rep 3

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32853
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727654
ID:
306727654
6.

Leaves, pair 3, outdoors, biol rep 2

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32853
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727653
ID:
306727653
7.

Leaves, pair 3, outdoors, biol rep 1

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32853
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727652
ID:
306727652
8.

Leaves, pair 3, indoors, biol rep 3

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32853
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727651
ID:
306727651
9.

Leaves, pair 3, indoors, biol rep 2

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32853
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727650
ID:
306727650
10.

Leaves, pair 3, indoors, biol rep 1

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32853
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727649
ID:
306727649
11.

Leaves, pair 2, outdoors, biol rep 3

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32853
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727648
ID:
306727648
12.

Leaves, pair 2, outdoors, biol rep 2

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32853
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727647
ID:
306727647
13.

Leaves, pair 2, outdoors, biol rep 1

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32853
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727646
ID:
306727646
14.

Leaves, pair 2, indoors, biol rep 3

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32853
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727645
ID:
306727645
15.

Leaves, pair 2, indoors, biol rep 2

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32853
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727644
ID:
306727644
16.

Leaves, pair 2, indoors, biol rep 1

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32853
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727643
ID:
306727643
17.

Leaf protoplasts, total, biol rep 3

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32852
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727668
ID:
306727668
18.

Leaf protoplasts, total, biol rep 2

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32852
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727667
ID:
306727667
19.

Leaf protoplasts, total, biol rep 1

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32852
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727666
ID:
306727666
20.

Leaf protoplasts, mesophyll, biol rep 3

Organism:
Catharanthus roseus
Source name:
leaf
Platform:
GPL32852
Series:
GSE217852
Download data: TXT
Sample
Accession:
GSM6727665
ID:
306727665
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db=gds|term=(txid167487[Organism:exp])%20AND%20gds_sra[filter]|query=7|qty=2|blobid=MCID_6723d22fbc40331ebe769b7d|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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