2013[Gene ID] - ClinVar - NCBI

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	Variation	Gene (Protein Change)	Type (Consequence)	Condition	Classification, Review status
Select item 58594	GRCh38/hg38 16p13.3-13.13(chr16:23141-11296695)x3	LOC112340388, LOC112441449 +821 more	Copy number gain	See cases	GPathogenic
Select item 150284	GRCh38/hg38 16p13.3-13.12(chr16:43732-13326806)x3	LOC130058535, LOC130058536 +916 more	Copy number gain	See cases	GPathogenic
Select item 144298	GRCh38/hg38 16p13.3-13.13(chr16:46766-11525516)x3	LOC105371046, LOC105371050 +842 more	Copy number gain	See cases	GPathogenic
Select item 155643	GRCh38/hg38 16p13.3-13.11(chr16:666662-15743104)x3	LOC130058149, LOC130058150 +925 more	Copy number gain	See cases	GPathogenic
Select item 144327	GRCh38/hg38 16p13.3-11.2(chr16:4644892-29170820)x3	ABAT, ABCC1 +851 more	Copy number gain	See cases	GPathogenic
Select item 1266482	NM_001424.6(EMP2):c.*172G>C	EMP2	Single nucleotide variant (3 prime UTR variant)	not provided	GBenign
Select item 1243513	NM_001424.6(EMP2):c.*164del	EMP2	Deletion (3 prime UTR variant)	not provided	GBenign
Select item 1229140	NM_001424.6(EMP2):c.147_152dup	EMP2	Duplication (3 prime UTR variant)	not provided	GBenign
Select item 1706774	NM_001424.6(EMP2):c.142_145A[4]GAAAA[1]	EMP2	Microsatellite (3 prime UTR variant)	not provided	GLikely benign
Select item 1237080	NM_001424.6(EMP2):c.141_142insG	EMP2	Insertion (3 prime UTR variant)	not provided	GBenign
Select item 1287362	NM_001424.6(EMP2):c.*141A>G	EMP2	Single nucleotide variant (3 prime UTR variant)	not provided	GBenign
Select item 1328635	NM_001424.6(EMP2):c.*140A>G	EMP2	Single nucleotide variant (3 prime UTR variant)	not provided	GLikely benign
Select item 1704905	NM_001424.6(EMP2):c.*137A>G	EMP2	Single nucleotide variant (3 prime UTR variant)	not provided	GLikely benign
Select item 1191904	NM_001424.6(EMP2):c.*132A>G	EMP2	Single nucleotide variant (3 prime UTR variant)	not provided	GLikely benign
Select item 1264243	NM_001424.6(EMP2):c.*131A>G	EMP2	Single nucleotide variant (3 prime UTR variant)	not provided	GBenign
Select item 1201301	NM_001424.6(EMP2):c.*98G>A	EMP2	Single nucleotide variant (3 prime UTR variant)	not provided	GLikely benign
Select item 3055582	NM_001424.6(EMP2):c.*9A>G	EMP2	Single nucleotide variant (3 prime UTR variant)	EMP2-related disorder	GLikely benign
Select item 1312429	NM_001424.6(EMP2):c.497G>A (p.Arg166His)	EMP2 (R166H)	Single nucleotide variant (missense variant)	Nephrotic syndrome, type 10 +2 more	GUncertain significance
Select item 1581264	NM_001424.6(EMP2):c.468C>T (p.Ser156=)	EMP2	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 2226461	NM_001424.6(EMP2):c.466A>T (p.Ser156Cys)	EMP2 (S156C)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3060612	NM_001424.6(EMP2):c.459C>A (p.Thr153=)	EMP2	Single nucleotide variant (synonymous variant)	EMP2-related disorder	GLikely benign
Select item 2077728	NM_001424.6(EMP2):c.451G>C (p.Ala151Pro)	EMP2 (A151P)	Single nucleotide variant (missense variant)	not provided	GUncertain significance
Select item 2993087	NM_001424.6(EMP2):c.432C>T (p.Ile144=)	EMP2	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 2180054	NM_001424.6(EMP2):c.427T>C (p.Tyr143His)	EMP2 (Y143H)	Single nucleotide variant (missense variant)	Nephrotic syndrome, type 10 +1 more	GUncertain significance
Select item 591124	NM_001424.6(EMP2):c.422A>G (p.Tyr141Cys)	EMP2 (Y141C)	Single nucleotide variant (missense variant)	not provided	GUncertain significance
Select item 2419357	NM_001424.6(EMP2):c.417C>T (p.Tyr139=)	EMP2	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 1201554	NM_001424.6(EMP2):c.402C>T (p.Thr134=)	EMP2	Single nucleotide variant (synonymous variant)	not provided	GBenign/Likely benign
Select item 2215913	NM_001424.6(EMP2):c.397G>A (p.Val133Met)	EMP2 (V133M)	Single nucleotide variant (missense variant)	not specified	GLikely benign
Select item 1948446	NM_001424.6(EMP2):c.390C>A (p.Phe130Leu)	EMP2 (F130L)	Single nucleotide variant (missense variant)	not provided	GUncertain significance
Select item 2417332	NM_001424.6(EMP2):c.383C>T (p.Ala128Val)	EMP2 (A128V)	Single nucleotide variant (missense variant)	not provided	GUncertain significance
Select item 1928050	NM_001424.6(EMP2):c.383C>A (p.Ala128Glu)	EMP2 (A128E)	Single nucleotide variant (missense variant)	not provided	GUncertain significance
Select item 2540485	NM_001424.6(EMP2):c.367A>G (p.Ile123Val)	EMP2 (I123V)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2077729	NM_001424.6(EMP2):c.361G>A (p.Glu121Lys)	EMP2 (E121K)	Single nucleotide variant (missense variant)	not specified +1 more	GUncertain significance
Select item 2140842	NM_001424.6(EMP2):c.359G>A (p.Arg120His)	EMP2 (R120H)	Single nucleotide variant (missense variant)	not specified +1 more	GUncertain significance
Select item 2530627	NM_001424.6(EMP2):c.347A>G (p.Tyr116Cys)	EMP2 (Y116C)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2220127	NM_001424.6(EMP2):c.334G>A (p.Ala112Thr)	EMP2 (A112T)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 1258771	NM_001424.6(EMP2):c.317-136T>C	EMP2	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1188330	NM_001424.6(EMP2):c.316+248G>A	EMP2	Single nucleotide variant (intron variant)	not provided	GLikely benign
Select item 1248762	NM_001424.6(EMP2):c.316+148TG[11]	EMP2	Microsatellite (intron variant)	not provided	GBenign
Select item 1206497	NM_001424.6(EMP2):c.316+148TG[12]	EMP2	Microsatellite (intron variant)	not provided	GLikely benign
Select item 1989975	NM_001424.6(EMP2):c.316+14C>T	EMP2	Single nucleotide variant (intron variant)	not provided	GLikely benign
Select item 1970405	NM_001424.6(EMP2):c.316+9A>C	EMP2	Single nucleotide variant (intron variant)	not provided	GLikely benign
Select item 2066836	NM_001424.6(EMP2):c.316+4A>G	EMP2	Single nucleotide variant (intron variant)	not provided	GUncertain significance
Select item 3029451	NM_001424.6(EMP2):c.294C>A (p.Thr98=)	EMP2	Single nucleotide variant (synonymous variant)	EMP2-related disorder	GLikely benign
Select item 2177903	NM_001424.6(EMP2):c.285T>C (p.Phe95=)	EMP2	Single nucleotide variant (synonymous variant)	not provided +1 more	GLikely benign
Select item 2615489	NM_001424.6(EMP2):c.263G>T (p.Arg88Leu)	EMP2 (R88L)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2214763	NM_001424.6(EMP2):c.262C>T (p.Arg88Cys)	EMP2 (R88C)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2171015	NM_001424.6(EMP2):c.246C>T (p.Phe82=)	EMP2	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 2174733	NM_001424.6(EMP2):c.237C>T (p.Phe79=)	EMP2	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 1366154	NM_001424.6(EMP2):c.232G>A (p.Ala78Thr)	EMP2 (A78T)	Single nucleotide variant (missense variant)	not provided +1 more	GUncertain significance
Select item 2049965	NM_001424.6(EMP2):c.228C>T (p.Cys76=)	EMP2	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 3042834	NM_001424.6(EMP2):c.219T>C (p.Ile73=)	EMP2	Single nucleotide variant (synonymous variant)	EMP2-related disorder	GLikely benign
Select item 450012	NM_001424.6(EMP2):c.207C>G (p.Ile69Met)	EMP2 (I69M)	Single nucleotide variant (missense variant)	not provided	GUncertain significance
Select item 3088781	NM_001424.6(EMP2):c.196G>A (p.Ala66Thr)	EMP2 (A66T)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2256782	NM_001424.6(EMP2):c.195G>C (p.Gln65His)	EMP2 (Q65H)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 1230583	NM_001424.6(EMP2):c.189G>A (p.Ala63=)	EMP2	Single nucleotide variant (synonymous variant)	not provided	GBenign
Select item 2038102	NM_001424.6(EMP2):c.188C>T (p.Ala63Val)	EMP2 (A63V)	Single nucleotide variant (missense variant)	Nephrotic syndrome, type 10 +2 more	GUncertain significance
Select item 139531	NM_001424.6(EMP2):c.184C>T (p.Gln62Ter)	EMP2 (Q62*)	Single nucleotide variant (nonsense)	Nephrotic syndrome, type 10	GPathogenic
Select item 1563987	NM_001424.6(EMP2):c.180G>A (p.Thr60=)	EMP2	Single nucleotide variant (synonymous variant)	not provided	GBenign
Select item 1958639	NM_001424.6(EMP2):c.170-12C>A	EMP2	Single nucleotide variant (intron variant)	not provided	GLikely benign
Select item 258093	NM_001424.6(EMP2):c.170-14C>T	EMP2	Single nucleotide variant (intron variant)	not specified +2 more	GBenign
Select item 1253217	NM_001424.6(EMP2):c.170-54A>G	EMP2	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1217452	NM_001424.6(EMP2):c.170-126G>A	EMP2	Single nucleotide variant (intron variant)	not provided	GLikely benign
Select item 1214088	NM_001424.6(EMP2):c.170-131T>A	EMP2	Single nucleotide variant (intron variant)	not provided	GLikely benign
Select item 1225271	NM_001424.6(EMP2):c.170-151G>A	EMP2	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1280605	NM_001424.6(EMP2):c.170-198A>G	EMP2	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1268923	NM_001424.6(EMP2):c.170-234G>A	EMP2	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1239902	NM_001424.6(EMP2):c.170-282G>A	EMP2	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 2956411	NM_001424.6(EMP2):c.169+12T>A	EMP2	Single nucleotide variant (intron variant)	not provided	GLikely benign
Select item 1224057	NM_001424.6(EMP2):c.169+9G>C	EMP2	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1581494	NM_001424.6(EMP2):c.169+7G>A	EMP2	Single nucleotide variant (intron variant)	not provided	GLikely benign
Select item 1220016	NM_001424.6(EMP2):c.151A>G (p.Ile51Val)	EMP2 (I51V)	Single nucleotide variant (missense variant)	not provided	GBenign/Likely benign
Select item 2202929	NM_001424.6(EMP2):c.138G>A (p.Thr46=)	EMP2	Single nucleotide variant (synonymous variant)	not provided +1 more	GLikely benign
Select item 1604999	NM_001424.6(EMP2):c.129C>T (p.Thr43=)	EMP2	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 2038547	NM_001424.6(EMP2):c.128C>T (p.Thr43Ile)	EMP2 (T43I)	Single nucleotide variant (missense variant)	not specified +1 more	GUncertain significance
Select item 2622725	NM_001424.6(EMP2):c.110A>G (p.Asp37Gly)	EMP2 (D37G)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2268005	NM_001424.6(EMP2):c.91G>A (p.Gly31Arg)	EMP2 (G31R)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 1246326	NM_001424.6(EMP2):c.79-91T>C	EMP2	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1272750	NM_001424.6(EMP2):c.79-144C>T	EMP2	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1222762	NM_001424.6(EMP2):c.79-173C>T	EMP2	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1237768	NM_001424.6(EMP2):c.78+50A>G	EMP2	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 3237408	NM_001424.6(EMP2):c.78+1G>C	EMP2	Single nucleotide variant (splice donor variant)	Nephrotic syndrome, type 10	GLikely pathogenic
Select item 592042	NM_001424.6(EMP2):c.78+1G>A	EMP2	Single nucleotide variant (splice donor variant)	not provided	GUncertain significance
Select item 3088783	NM_001424.6(EMP2):c.73G>A (p.Asp25Asn)	EMP2 (D25N)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2897427	NM_001424.6(EMP2):c.72C>T (p.Val24=)	EMP2	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 3088782	NM_001424.6(EMP2):c.70G>A (p.Val24Ile)	EMP2 (V24I)	Single nucleotide variant (missense variant)	not specified	GLikely benign
Select item 1897058	NM_001424.6(EMP2):c.30C>T (p.Ala10=)	EMP2	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 139533	NM_001424.6(EMP2):c.28G>A (p.Ala10Thr)	EMP2 (A10T)	Single nucleotide variant (missense variant)	not provided	GUncertain significance
Select item 2077004	NM_001424.6(EMP2):c.27C>T (p.Ile9=)	EMP2	Single nucleotide variant (synonymous variant)	not provided +1 more	GBenign/Likely benign
Select item 139532	NM_001424.6(EMP2):c.21C>G (p.Phe7Leu)	EMP2 (F7L)	Single nucleotide variant (missense variant)	Nephrotic syndrome, type 10	GPathogenic
Select item 1328659	NM_001424.6(EMP2):c.-6G>T	EMP2	Single nucleotide variant (5 prime UTR variant)	not provided	GLikely benign
Select item 1251512	NM_001424.6(EMP2):c.-60-172T>C	EMP2	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 153642	GRCh38/hg38 16p13.13(chr16:10560475-10775716)x1	EMP2, LOC105371079 +11 more	Copy number loss	See cases	GUncertain significance
Select item 2685553	GRCh37/hg19 16p13.13(chr16:10671445-10864286)x1	EMP2, NUBP1 +2 more	Copy number loss	not provided	GUncertain significance
Select item 2423419	NC_000016.9:g.(?_8829597)_(11683693_?)dup	ABAT, ATF7IP2 +20 more	Duplication	Landau-Kleffner syndrome	GUncertain significance
Select item 2422627	NC_000016.9:g.(?_10637407)_(10971259_?)del	CIITA, EMP2 +3 more	Deletion	MHC class II deficiency	GPathogenic
Select item 1809045	GRCh37/hg19 16p13.2-13.13(chr16:10473817-10637006)x1	ATF7IP2, EMP2	Copy number loss	not provided	GUncertain significance
Select item 1809030	GRCh37/hg19 16p13.2-13.13(chr16:10423631-12176517)x3	CIITA, ATF7IP2 +21 more	Copy number gain	not provided	GUncertain significance
Select item 1807793	GRCh37/hg19 16p13.3-11.2(chr16:4380767-30445350)x3	ABAT, ABCC1 +226 more	Copy number gain	not provided	GPathogenic
Select item 1480512	NC_000016.9:g.(?_8829597)_(11650586_?)dup	CLEC16A, DEXI +20 more	Duplication	MHC class II deficiency +1 more	GUncertain significance

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