ClinVar Genomic variation as it relates to human health
GRCh38/hg38 Xq28(chrX:153905292-154361918)
Germline
Classification
(1)
Pathogenic
no assertion criteria provided
Somatic
No data submitted for somatic clinical impact
Somatic
No data submitted for oncogenicity
Genes
Gene | OMIM | ClinGen Gene Dosage Sensitivity Curation | Variation Viewer | Related variants | ||
---|---|---|---|---|---|---|
HI score | TS score | Within gene | All | |||
AVPR2 | Sufficient evidence for dosage pathogenicity | No evidence available |
GRCh38 GRCh37 |
314 | 576 | |
FLNA | Sufficient evidence for dosage pathogenicity | No evidence available |
GRCh38 GRCh37 |
3151 | 3592 | |
L1CAM | Sufficient evidence for dosage pathogenicity | No evidence available |
GRCh38 GRCh37 |
1265 | 1530 | |
MECP2 | Sufficient evidence for dosage pathogenicity | No evidence available |
GRCh38 GRCh37 |
1901 | 2229 | |
NAA10 | Little evidence for dosage pathogenicity | No evidence available |
GRCh38 GRCh37 |
155 | 434 | |
ARHGAP4 | - | - |
GRCh38 GRCh37 |
89 | 356 | |
HCFC1 | - | - |
GRCh38 GRCh37 |
1265 | 1566 | |
HCFC1-AS1 | - | - | - | GRCh38 | - | 120 |
IRAK1 | - | - |
GRCh38 GRCh37 |
60 | 345 | |
L1CAM-AS1 | - | - | - | GRCh38 | - | 123 |
There are 37 more genes affected by this variant. See the full set of genes in Variation Viewer (GRCh38).
Conditions - Germline
Condition | Classification
(# of submissions) |
Review status | Last evaluated | Variation/condition record |
---|---|---|---|---|
Pathogenic (1) |
|
Jun 1, 2010 | RCV000012611.25 |
Citations for germline classification of this variant
HelpText-mined citations for this variant ...
HelpRecord last updated Oct 15, 2023
NCBI staff added the information about the genomic boundaries of this copy number gain by determining the location on GRCh38 of the probes listed in Table 1 of the paper by Meins et al., 2005 (PubMed 15689435).