| | | Single nucleotide variant (missense variant) | not provided | |
| | | Duplication | Hereditary factor VIII deficiency disease | |
| | LOC130068896, RAB39B (M1fs) | Duplication (frameshift variant) | not specified | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | Inborn genetic diseases | |
| | | Single nucleotide variant (missense variant) | Inborn genetic diseases | |
| | LOC130068417, LOC130068418 +2599 more | Copy number gain | Klinefelter syndrome | |
| | | Copy number gain | Chromosome Xq28 duplication syndrome | |
| | | Copy number loss | See cases | |
| | SLITRK2, SLITRK4 +221 more | Copy number loss | not provided | |
| | | Copy number gain | not specified | |
| | | Copy number loss | not specified | |
| | | Copy number loss | not specified | |
| | | Copy number gain | not provided | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | | Single nucleotide variant (nonsense) | not provided | |
| | | Single nucleotide variant (synonymous variant) | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number loss | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | Inborn genetic diseases | |
| | | Copy number gain | not provided | |
| | | Copy number gain | Klinefelter syndrome | |
| | | Single nucleotide variant (missense variant) | not specified | |
| | | Copy number gain | Syndromic X-linked intellectual disability Lubs type | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Duplication | not provided | |
| | | Deletion | Dyskeratosis congenita | |
| | | Duplication | Adrenoleukodystrophy | |
| | | Deletion | Heterotopia, periventricular, X-linked dominant +8 more | |
| | | Single nucleotide variant (missense variant) | Inborn genetic diseases | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number gain | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number gain | Klinefelter syndrome | |
| | | Copy number loss | Turner syndrome | |
| | | Copy number loss | Turner syndrome | |
| | | Copy number gain | Hypotonia +2 more | |
| | | Copy number gain | Chromosome Xq28 duplication syndrome +1 more | |
| | | Copy number gain | not provided | |
| | | Single nucleotide variant (synonymous variant) | not provided | |
| | | Duplication (frameshift variant) | not provided | |
| | HCFC1-AS1, IDH3G +200 more | Deletion | Ectodermal dysplasia and immunodeficiency 1 +5 more | |
| | | Single nucleotide variant (missense variant) | Intellectual disability, X-linked 72 | |
| | | Duplication (frameshift variant) | not provided | |
| | | Single nucleotide variant (synonymous variant) | Inborn genetic diseases +1 more | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Deletion (frameshift variant) | Developmental disorder | |
| | | Deletion | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number gain | Chromosome Xq28 duplication syndrome | |
| | | Copy number loss | RAB39B-related disorder | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Deletion (inframe_indel) | not provided | |
| | | Single nucleotide variant | not provided | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | | Single nucleotide variant | not provided | |
| | LOC130068896, LOC130068897 +1 more | Deletion | Early-onset parkinsonism-intellectual disability syndrome | |
| | | Duplication (intron variant) | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number gain | Intellectual disability | |
| | | Single nucleotide variant (missense variant) | not provided +2 more | |
| | | Copy number gain | not provided | |
| | ARMCX4, CXorf51B +513 more | Copy number gain | See cases | |
| | | Copy number gain | not provided | |
| | | Copy number loss | not provided | |
| | | Single nucleotide variant (missense variant) | Intellectual disability, X-linked 72 | |
| | | Single nucleotide variant (missense variant) | Intellectual disability, X-linked 72 | |
| | | Copy number gain | See cases | |
| | | Copy number gain | See cases | |
| | | Copy number loss | Intellectual disability | |
| | | Single nucleotide variant (3 prime UTR variant) | Intellectual disability, X-linked 72 | |
| | | Single nucleotide variant (3 prime UTR variant) | Intellectual disability, X-linked 72 | |
| | | Single nucleotide variant (5 prime UTR variant) | Intellectual disability, X-linked 72 | |
| | | Single nucleotide variant (5 prime UTR variant) | Intellectual disability, X-linked 72 | |
| | | Single nucleotide variant (3 prime UTR variant) | Intellectual disability, X-linked 72 | |
| | | Single nucleotide variant (3 prime UTR variant) | Intellectual disability, X-linked 72 | |
| | | Single nucleotide variant (3 prime UTR variant) | Intellectual disability, X-linked 72 +1 more | GConflicting classifications of pathogenicity |
| | | Copy number gain | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number gain | not provided | |