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NM_000116.5(TAFAZZIN):c.778-63_778-51del AND TAFAZZIN-related disorder

Germline classification:
Likely benign (1 submission)
Last evaluated:
Mar 13, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV004550295.2

Allele description [Variation Report for NM_000116.5(TAFAZZIN):c.778-63_778-51del]

NM_000116.5(TAFAZZIN):c.778-63_778-51del

Gene:
TAFAZZIN:tafazzin, phospholipid-lysophospholipid transacylase [Gene - OMIM - HGNC]
Variant type:
Microsatellite
Cytogenetic location:
Xq28
Genomic location:
Preferred name:
NM_000116.5(TAFAZZIN):c.778-63_778-51del
HGVS:
  • NC_000023.11:g.154420827CTCCCAGGGCACC[1]
  • NG_009634.2:g.14293CTCCCAGGGCACC[1]
  • NM_000116.4:c.778-63_778-51del13
  • NM_000116.5:c.778-63_778-51delMANE SELECT
  • NM_001303465.2:c.790-63_790-51del
  • NM_181311.4:c.688-63_688-51del
  • NM_181312.4:c.736-63_736-51del
  • NM_181313.4:c.646-63_646-51del
  • LRG_131t1:c.778-63_778-51del
  • LRG_131:g.14293CTCCCAGGGCACC[1]
  • NC_000023.10:g.153649162_153649174del
  • NC_000023.10:g.153649166CTCCCAGGGCACC[1]
  • NG_009634.1:g.14290CTCCCAGGGCACC[1]
Links:
dbSNP: rs782249471
NCBI 1000 Genomes Browser:
rs782249471
Molecular consequence:
  • NM_000116.5:c.778-63_778-51del - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001303465.2:c.790-63_790-51del - intron variant - [Sequence Ontology: SO:0001627]
  • NM_181311.4:c.688-63_688-51del - intron variant - [Sequence Ontology: SO:0001627]
  • NM_181312.4:c.736-63_736-51del - intron variant - [Sequence Ontology: SO:0001627]
  • NM_181313.4:c.646-63_646-51del - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Name:
TAFAZZIN-related disorder
Synonyms:
TAFAZZIN-Related Disorders; TAFAZZIN-related condition
Identifiers:

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV004726776PreventionGenetics, part of Exact Sciences
no assertion criteria provided
Likely benign
(Mar 13, 2020) 		germlineclinical testing

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From PreventionGenetics, part of Exact Sciences, SCV004726776.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 10, 2024