NM_001126108.2(SLC12A3):c.733C>A (p.Leu245Met) AND Inborn genetic diseases

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Oct 13, 2023
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV004456245.1

Allele description [Variation Report for NM_001126108.2(SLC12A3):c.733C>A (p.Leu245Met)]

NM_001126108.2(SLC12A3):c.733C>A (p.Leu245Met)

Gene:

SLC12A3:solute carrier family 12 member 3 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

16q13

Genomic location:

Preferred name:

NM_001126108.2(SLC12A3):c.733C>A (p.Leu245Met)

HGVS:

NC_000016.10:g.56870227C>A
NG_009386.2:g.10021C>A
NM_000339.3:c.733C>A
NM_001126107.2:c.730C>A
NM_001126108.2:c.733C>AMANE SELECT
NM_001410896.1:c.730C>A
NP_000330.3:p.Leu245Met
NP_001119579.2:p.Leu244Met
NP_001119580.2:p.Leu245Met
NP_001397825.1:p.Leu244Met
NC_000016.9:g.56904139C>A
NM_000339.2:c.733C>A

Protein change:

L244M

Molecular consequence:

NM_000339.3:c.733C>A - missense variant - [Sequence Ontology: SO:0001583]
NM_001126107.2:c.730C>A - missense variant - [Sequence Ontology: SO:0001583]
NM_001126108.2:c.733C>A - missense variant - [Sequence Ontology: SO:0001583]
NM_001410896.1:c.730C>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:: Inborn genetic diseases
Identifiers:: MeSH: D030342; MedGen: C0950123

Recent activity

Clear Turn Off Turn On

Amphiophiura penichra
Amphiophiura penichra
The near complete mitochondrial genome of Amphiophiura penichra and Ophiocten ludwigi (Ohiuroidea, Ophiurina)

BioProject
Chain L, GTP Cyclohydrolase I Feedback Regulatory Protein
Chain L, GTP Cyclohydrolase I Feedback Regulatory Protein
gi|20150268|pdb|1IS8|L

Protein
Chain F, GTP Cyclohydrolase I
Chain F, GTP Cyclohydrolase I
gi|20150262|pdb|1IS8|F

Protein

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

Help

Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV004951096	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Oct 13, 2023)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV004951096

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Oct 13, 2023)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV004951096.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.733C>A (p.L245M) alteration is located in exon 5 (coding exon 5) of the SLC12A3 gene. This alteration results from a C to A substitution at nucleotide position 733, causing the leucine (L) at amino acid position 245 to be replaced by a methionine (M). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: May 7, 2024

ClinVar

Relating variation to medicine