NM_145201.6(NAPRT):c.1495C>A (p.Leu499Met) AND not specified

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Oct 4, 2022
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV004192778.1

Allele description [Variation Report for NM_145201.6(NAPRT):c.1495C>A (p.Leu499Met)]

NM_145201.6(NAPRT):c.1495C>A (p.Leu499Met)

Gene:

NAPRT:nicotinate phosphoribosyltransferase [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

8q24.3

Genomic location:

Preferred name:

NM_145201.6(NAPRT):c.1495C>A (p.Leu499Met)

HGVS:

NC_000008.11:g.143575045G>T
NM_001286829.2:c.1456C>A
NM_001363145.1:c.1414C>A
NM_001363146.1:c.811C>A
NM_145201.6:c.1495C>AMANE SELECT
NP_001273758.1:p.Leu486Met
NP_001350074.1:p.Leu472Met
NP_001350075.1:p.Leu271Met
NP_660202.3:p.Leu499Met
NC_000008.10:g.144657215G>T
NM_145201.4:c.1495C>A

Protein change:

L271M

Molecular consequence:

NM_001286829.2:c.1456C>A - missense variant - [Sequence Ontology: SO:0001583]
NM_001363145.1:c.1414C>A - missense variant - [Sequence Ontology: SO:0001583]
NM_001363146.1:c.811C>A - missense variant - [Sequence Ontology: SO:0001583]
NM_145201.6:c.1495C>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:: AllHighlyPenetrant
Identifiers:: MedGen: CN169374

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Roles of chromatin factors in C. elegans development - WormBook
Roles of chromatin factors in C. elegans development - WormBook
B4GALNT2 [Ochotona princeps]
B4GALNT2 [Ochotona princeps]
Gene ID:101525207

Gene
ndhD [Cressa cretica]
ndhD [Cressa cretica]
Gene ID:33870292

Gene
rpl32 [Cressa cretica]
rpl32 [Cressa cretica]
Gene ID:33870303

Gene

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV003691690	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Oct 4, 2022)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV003691690

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Oct 4, 2022)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV003691690.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.1495C>A (p.L499M) alteration is located in exon 12 (coding exon 12) of the NAPRT gene. This alteration results from a C to A substitution at nucleotide position 1495, causing the leucine (L) at amino acid position 499 to be replaced by a methionine (M). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Oct 26, 2024

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