NM_006588.4(SULT1C4):c.69G>C (p.Lys23Asn) AND not specified

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Jan 4, 2022
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV004125516.1

Allele description [Variation Report for NM_006588.4(SULT1C4):c.69G>C (p.Lys23Asn)]

NM_006588.4(SULT1C4):c.69G>C (p.Lys23Asn)

Gene:

SULT1C4:sulfotransferase family 1C member 4 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

2q12.3

Genomic location:

Preferred name:

NM_006588.4(SULT1C4):c.69G>C (p.Lys23Asn)

HGVS:

NC_000002.12:g.108378406G>C
NM_001321770.2:c.69G>C
NM_006588.4:c.69G>CMANE SELECT
NP_001308699.1:p.Lys23Asn
NP_006579.2:p.Lys23Asn
NC_000002.11:g.108994862G>C
NM_006588.2:c.69G>C
NR_135776.2:n.453G>C
NR_135779.2:n.453G>C

Protein change:

K23N

Molecular consequence:

NM_001321770.2:c.69G>C - missense variant - [Sequence Ontology: SO:0001583]
NM_006588.4:c.69G>C - missense variant - [Sequence Ontology: SO:0001583]
NR_135776.2:n.453G>C - non-coding transcript variant - [Sequence Ontology: SO:0001619]
NR_135779.2:n.453G>C - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Synonyms:: AllHighlyPenetrant
Identifiers:: MedGen: CN169374

Recent activity

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type II iodothyronine deiodinase isoform b [Homo sapiens]
type II iodothyronine deiodinase isoform b [Homo sapiens]
gi|1487187916|ref|NP_000784.3|

Protein
fc08a10.x1 Zebrafish WashU MPIMG EST Danio rerio cDNA clone IMAGE:3720762 3', mR...
fc08a10.x1 Zebrafish WashU MPIMG EST Danio rerio cDNA clone IMAGE:3720762 3', mRNA sequence
gi|4610691|gnl|dbEST|2420077|gb|AI6 .1|

Nucleotide
RPS3A ribosomal protein S3A [Gallus gallus]
RPS3A ribosomal protein S3A [Gallus gallus]
Gene ID:422477

Gene

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV003605425	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Jan 4, 2022)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV003605425

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Jan 4, 2022)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV003605425.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.69G>C (p.K23N) alteration is located in exon 1 (coding exon 1) of the SULT1C4 gene. This alteration results from a G to C substitution at nucleotide position 69, causing the lysine (K) at amino acid position 23 to be replaced by an asparagine (N). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Nov 3, 2024

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