NM_001128840.3(CACNA1D):c.5165G>C (p.Ser1722Thr) AND Inborn genetic diseases

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Aug 12, 2021
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV004029191.1

Allele description [Variation Report for NM_001128840.3(CACNA1D):c.5165G>C (p.Ser1722Thr)]

NM_001128840.3(CACNA1D):c.5165G>C (p.Ser1722Thr)

Gene:

CACNA1D:calcium voltage-gated channel subunit alpha1 D [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

3p21.1

Genomic location:

Preferred name:

NM_001128840.3(CACNA1D):c.5165G>C (p.Ser1722Thr)

HGVS:

NC_000003.12:g.53801182G>C
NG_032999.1:g.311134G>C
NM_000720.4:c.5225G>C
NM_001128839.3:c.5120G>C
NM_001128840.3:c.5165G>CMANE SELECT
NP_000711.1:p.Ser1742Thr
NP_001122311.1:p.Ser1707Thr
NP_001122312.1:p.Ser1722Thr
NC_000003.11:g.53835209G>C
NM_000720.2:c.5225G>C
p.Ser1742Thr

Protein change:

S1707T

Links:

dbSNP: rs759409255

NCBI 1000 Genomes Browser:

rs759409255

Molecular consequence:

NM_000720.4:c.5225G>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001128839.3:c.5120G>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001128840.3:c.5165G>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:: Inborn genetic diseases
Identifiers:: MeSH: D030342; MedGen: C0950123

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV004915198	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Aug 12, 2021)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV004915198

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Aug 12, 2021)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV004915198.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.5225G>C (p.S1742T) alteration is located in exon 43 (coding exon 43) of the CACNA1D gene. This alteration results from a G to C substitution at nucleotide position 5225, causing the serine (S) at amino acid position 1742 to be replaced by a threonine (T). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Sep 29, 2024

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