NM_014140.4(SMARCAL1):c.962G>A (p.Gly321Asp) AND Inborn genetic diseases

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Dec 16, 2023
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV004020134.1

Allele description [Variation Report for NM_014140.4(SMARCAL1):c.962G>A (p.Gly321Asp)]

NM_014140.4(SMARCAL1):c.962G>A (p.Gly321Asp)

Gene:

SMARCAL1:SNF2 related chromatin remodeling annealing helicase 1 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

2q35

Genomic location:

Preferred name:

NM_014140.4(SMARCAL1):c.962G>A (p.Gly321Asp)

HGVS:

NC_000002.12:g.216420398G>A
NG_009771.1:g.12985G>A
NM_001127207.2:c.962G>A
NM_014140.4:c.962G>AMANE SELECT
NP_001120679.1:p.Gly321Asp
NP_054859.2:p.Gly321Asp
NP_054859.2:p.Gly321Asp
LRG_108t1:c.962G>A
LRG_108:g.12985G>A
LRG_108p1:p.Gly321Asp
NC_000002.11:g.217285121G>A
NM_014140.3:c.962G>A

Protein change:

G321D

Links:

dbSNP: rs148752234

NCBI 1000 Genomes Browser:

rs148752234

Molecular consequence:

NM_001127207.2:c.962G>A - missense variant - [Sequence Ontology: SO:0001583]
NM_014140.4:c.962G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:: Inborn genetic diseases
Identifiers:: MeSH: D030342; MedGen: C0950123

Recent activity

Clear Turn Off Turn On

UGT8 [Protobothrops mucrosquamatus]
UGT8 [Protobothrops mucrosquamatus]
Gene ID:107296372

Gene

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

Help

Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV004954247	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Dec 16, 2023)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV004954247

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Dec 16, 2023)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV004954247.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.962G>A (p.G321D) alteration is located in exon 5 (coding exon 3) of the SMARCAL1 gene. This alteration results from a G to A substitution at nucleotide position 962, causing the glycine (G) at amino acid position 321 to be replaced by an aspartic acid (D). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Oct 13, 2024

ClinVar

Relating variation to medicine