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NM_002427.4(MMP13):c.619T>G (p.Trp207Gly) AND Metaphyseal anadysplasia 1, autosomal dominant

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Mar 14, 2024
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV004019951.2

Allele description [Variation Report for NM_002427.4(MMP13):c.619T>G (p.Trp207Gly)]

NM_002427.4(MMP13):c.619T>G (p.Trp207Gly)

Gene:
MMP13:matrix metallopeptidase 13 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
11q22.2
Genomic location:
Preferred name:
NM_002427.4(MMP13):c.619T>G (p.Trp207Gly)
HGVS:
  • NC_000011.10:g.102954174A>C
  • NG_021404.1:g.6561T>G
  • NM_002427.4:c.619T>GMANE SELECT
  • NP_002418.1:p.Trp207Gly
  • NC_000011.9:g.102824903A>C
  • NM_002427.3:c.619T>G
  • P45452:p.Trp207Gly
Protein change:
W207G; TRP207GLY
Links:
UniProtKB: P45452#VAR_073418; OMIM: 600108.0005; dbSNP: rs140059558
NCBI 1000 Genomes Browser:
rs140059558
Molecular consequence:
  • NM_002427.4:c.619T>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Metaphyseal anadysplasia 1, autosomal dominant (MANDP1)
Synonyms:
Metaphyseal anadysplasia 1
Identifiers:
MedGen: C4016643

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV005016605Center for Genomic Medicine, King Faisal Specialist Hospital and Research Center
criteria provided, single submitter

(ACMG Guidelines, 2015)		Pathogenic
(Mar 14, 2024) 		germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Center for Genomic Medicine, King Faisal Specialist Hospital and Research Center, SCV005016605.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024