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NM_006005.3(WFS1):c.1676C>A (p.Ala559Asp) AND Wolfram syndrome 1

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Dec 19, 2023
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003992778.1

Allele description [Variation Report for NM_006005.3(WFS1):c.1676C>A (p.Ala559Asp)]

NM_006005.3(WFS1):c.1676C>A (p.Ala559Asp)

Gene:
WFS1:wolframin ER transmembrane glycoprotein [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
4p16.1
Genomic location:
Preferred name:
NM_006005.3(WFS1):c.1676C>A (p.Ala559Asp)
Other names:
p.Ala559Asp
HGVS:
  • NC_000004.12:g.6301471C>A
  • NG_011700.1:g.36622C>A
  • NM_001145853.1:c.1676C>A
  • NM_006005.3:c.1676C>AMANE SELECT
  • NP_001139325.1:p.Ala559Asp
  • NP_005996.1:p.Ala559Asp
  • NP_005996.2:p.Ala559Asp
  • LRG_1417t1:c.1676C>A
  • LRG_1417:g.36622C>A
  • LRG_1417p1:p.Ala559Asp
  • NC_000004.11:g.6303198C>A
  • NM_006005.2:c.1676C>A
Protein change:
A559D
Molecular consequence:
  • NM_001145853.1:c.1676C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_006005.3:c.1676C>A - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Wolfram syndrome 1 (WFS1)
Identifiers:
MONDO: MONDO:0009101; MedGen: C4551693; Orphanet: 3463; OMIM: 222300

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV004812023Undiagnosed Diseases Network, NIH - Undiagnosed Diseases Network (NIH), UDN
no assertion criteria provided
Likely pathogenic
(Dec 19, 2023)
unknownclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyes1not providednot providednot providedyesclinical testing

Details of each submission

From Undiagnosed Diseases Network, NIH - Undiagnosed Diseases Network (NIH), UDN, SCV004812023.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providedyesclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyesnot providedBloodnot provided1not providednot providednot provided

Last Updated: Sep 29, 2024