NM_005514.8(HLA-B):c.537_538insGA (p.Arg180fs) AND HLA-B-related disorder

Germline classification:: Benign (1 submission)
Last evaluated:: Dec 17, 2020
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV003981878.2

Allele description [Variation Report for NM_005514.8(HLA-B):c.537_538insGA (p.Arg180fs)]

NM_005514.8(HLA-B):c.537_538insGA (p.Arg180fs)

Gene:

HLA-B:major histocompatibility complex, class I, B [Gene - OMIM - HGNC]

Variant type:

Insertion

Cytogenetic location:

6p21.33

Genomic location:

Preferred name:

NM_005514.8(HLA-B):c.537_538insGA (p.Arg180fs)

HGVS:

NC_000006.12:g.31356248_31356249insTC
NG_023187.1:g.5964_5965insGA
NM_005514.8:c.537_538insGAMANE SELECT
NP_005505.2:p.Arg180fs
NC_000006.11:g.31324025_31324026insTC
NM_005514.7:c.537_538insGA

Protein change:

R180fs

Molecular consequence:

NM_005514.8:c.537_538insGA - frameshift variant - [Sequence Ontology: SO:0001589]

Condition(s)

Name:: HLA-B-related disorder
Synonyms:: HLA-B-related condition
Identifiers:

Recent activity

Clear Turn Off Turn On

Homo sapiens TPD52 like 3 (TPD52L3), transcript variant 2, mRNA
Homo sapiens TPD52 like 3 (TPD52L3), transcript variant 2, mRNA
gi|1677538064|ref|NM_001001874.3|

Nucleotide

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

Help

Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV004799217	PreventionGenetics, part of Exact Sciences	no assertion criteria provided	Benign (Dec 17, 2020)	germline	clinical testing

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV004799217

PreventionGenetics, part of Exact Sciences

no assertion criteria provided

Benign
(Dec 17, 2020)

germline

clinical testing

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From PreventionGenetics, part of Exact Sciences, SCV004799217.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

This variant is classified as benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Oct 13, 2024

ClinVar

Relating variation to medicine