NM_206933.4(USH2A):c.2665T>C (p.Leu889=) AND Retinal dystrophy

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Oct 1, 2023
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV003889078.1

Allele description [Variation Report for NM_206933.4(USH2A):c.2665T>C (p.Leu889=)]

NM_206933.4(USH2A):c.2665T>C (p.Leu889=)

Genes:

LOC122152296:Sharpr-MPRA regulatory region 8762 [Gene]
USH2A:usherin [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

1q41

Genomic location:

Preferred name:

NM_206933.4(USH2A):c.2665T>C (p.Leu889=)

HGVS:

NC_000001.11:g.216246729A>G
NG_009497.2:g.181720T>C
NG_076570.1:g.103A>G
NM_007123.6:c.2665T>C
NM_206933.4:c.2665T>CMANE SELECT
NP_009054.6:p.Leu889=
NP_996816.3:p.Leu889=
NC_000001.10:g.216420071A>G
NG_009497.1:g.181668T>C

Links:

dbSNP: rs1310133198

NCBI 1000 Genomes Browser:

rs1310133198

Molecular consequence:

NM_007123.6:c.2665T>C - synonymous variant - [Sequence Ontology: SO:0001819]
NM_206933.4:c.2665T>C - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:: Retinal dystrophy
Synonyms:: Inherited retinal dystrophy
Identifiers:: MONDO: MONDO:0019118; MeSH: D058499; MedGen: C0854723; Human Phenotype Ontology: HP:0000556

Recent activity

Clear Turn Off Turn On

D006732 (1)
MeSH
Horner Syndrome
Horner Syndrome
A syndrome associated with defective sympathetic innervation to one side of the face, including the eye. Clinical features include MIOSIS; mild BLEPHAROPTOSIS; and hemifacial ...<br/>Year introduced: 2000(1966)

MeSH
ACAN [Meleagris gallopavo]
ACAN [Meleagris gallopavo]
Gene ID:100549278

Gene
Tmtc2 [Cricetulus griseus]
Tmtc2 [Cricetulus griseus]
Gene ID:100750470

Gene

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

Help

Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV004708033	Dept Of Ophthalmology, Nagoya University	criteria provided, single submitter (Submitter's publication)	Uncertain significance (Oct 1, 2023)	germline	research

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV004708033

Dept Of Ophthalmology, Nagoya University

criteria provided, single submitter

(Submitter's publication)

Uncertain significance
(Oct 1, 2023)

germline

research

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	research

Details of each submission

From Dept Of Ophthalmology, Nagoya University, SCV004708033.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	research	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Sep 29, 2024

ClinVar

Relating variation to medicine