NM_005373.3(MPL):c.391+19T>G AND multiple conditions

This record was updated by the submitter. Please see the current version.

Germline classification:: Likely benign (1 submission)
Last evaluated:: Aug 22, 2023
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV003803244.1

Allele description

NM_005373.3(MPL):c.391+19T>G

Gene:

MPL:MPL proto-oncogene, thrombopoietin receptor [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

1p34.2

Genomic location:

Preferred name:

NM_005373.3(MPL):c.391+19T>G

HGVS:

NC_000001.11:g.43338739T>G
NG_007525.1:g.5936T>G
NM_005373.3:c.391+19T>GMANE SELECT
LRG_510:g.5936T>G
NC_000001.10:g.43804410T>G

Molecular consequence:

NM_005373.3:c.391+19T>G - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Name:: Congenital amegakaryocytic thrombocytopenia
Identifiers:: MONDO: MONDO:0800451; MedGen: C1327915; Orphanet: 3319; OMIM: PS604498

Name:: Essential thrombocythemia
Synonyms:: essential thrombocytemia; Suspected essential thromboythemia
Identifiers:: MONDO: MONDO:0005029; MeSH: D013920; MedGen: C0040028

Recent activity

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2221027[uid] (1)
Taxonomy
MAG: Deltaproteobacteria bacterium ADurb.Bin072 BWX71_contig000013, whole genome...
MAG: Deltaproteobacteria bacterium ADurb.Bin072 BWX71_contig000013, whole genome shotgun sequence
gi|1167417371|gb|MWEI01000013.1||gn :MWEI01|BWX71_contig000013

Nucleotide
Uncultured Serratia sp. isolate DGGE gel band 38 16S ribosomal RNA gene, partial...
Uncultured Serratia sp. isolate DGGE gel band 38 16S ribosomal RNA gene, partial sequence
gi|308190604|gb|GU361711.1|

Nucleotide
Taxonomy Links for Protein (Select 1861027839) (1)
Taxonomy
inner centromere protein INCENP [Homo sapiens]
inner centromere protein INCENP [Homo sapiens]
gi|9438179|gb|AAF87584.1|AF282265_1

Protein

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV004589253	Invitae	criteria provided, single submitter (Invitae Variant Classification Sherloc (09022015))	Likely benign (Aug 22, 2023)	germline	clinical testing	PubMed (1) [See all records that cite this PMID]

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV004589253

Invitae

criteria provided, single submitter

(Invitae Variant Classification Sherloc (09022015))

Likely benign
(Aug 22, 2023)

germline

clinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Citations

PubMed

Sherloc: a comprehensive refinement of the ACMG-AMP variant classification criteria.

Nykamp K, Anderson M, Powers M, Garcia J, Herrera B, Ho YY, Kobayashi Y, Patil N, Thusberg J, Westbrook M; Invitae Clinical Genomics Group., Topper S.

Genet Med. 2017 Oct;19(10):1105-1117. doi: 10.1038/gim.2017.37. Epub 2017 May 11. Erratum in: Genet Med. 2020 Jan;22(1):240. doi: 10.1038/s41436-019-0624-9.

PubMed [citation]

PMID:: 28492532
PMCID:: PMC5632818

Details of each submission

From Invitae, SCV004589253.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	PubMed (1)

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Apr 15, 2024

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