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NM_000138.5(FBN1):c.4205G>C (p.Cys1402Ser) AND Familial thoracic aortic aneurysm and aortic dissection

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Jun 6, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003528029.1

Allele description [Variation Report for NM_000138.5(FBN1):c.4205G>C (p.Cys1402Ser)]

NM_000138.5(FBN1):c.4205G>C (p.Cys1402Ser)

Gene:
FBN1:fibrillin 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
15q21.1
Genomic location:
Preferred name:
NM_000138.5(FBN1):c.4205G>C (p.Cys1402Ser)
HGVS:
  • NC_000015.10:g.48474260C>G
  • NG_008805.2:g.176529G>C
  • NM_000138.5:c.4205G>CMANE SELECT
  • NM_001406716.1:c.4205G>C
  • NP_000129.3:p.Cys1402Ser
  • NP_000129.3:p.Cys1402Ser
  • NP_001393645.1:p.Cys1402Ser
  • LRG_778t1:c.4205G>C
  • LRG_778:g.176529G>C
  • LRG_778p1:p.Cys1402Ser
  • NC_000015.9:g.48766457C>G
  • NM_000138.4:c.4205G>C
Protein change:
C1402S
Molecular consequence:
  • NM_000138.5:c.4205G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001406716.1:c.4205G>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Familial thoracic aortic aneurysm and aortic dissection (TAAD)
Synonyms:
Thoracic aortic aneurysm and aortic dissection; Thoracic aortic aneurysms and dissections
Identifiers:
MONDO: MONDO:0019625; MedGen: C4707243; Orphanet: 91387; OMIM: PS607086

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV004357388Color Diagnostics, LLC DBA Color Health
criteria provided, single submitter

(ACMG Guidelines, 2015)
Likely pathogenic
(Jun 6, 2022)
germlineclinical testing

PubMed (3)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Epidermal growth factor. Location of disulfide bonds.

Savage CR Jr, Hash JH, Cohen S.

J Biol Chem. 1973 Nov 25;248(22):7669-72. No abstract available.

PubMed [citation]
PMID:
4750422

Fibrillin-1 misfolding and disease.

Whiteman P, Hutchinson S, Handford PA.

Antioxid Redox Signal. 2006 Mar-Apr;8(3-4):338-46. Review.

PubMed [citation]
PMID:
16677079
See all PubMed Citations (3)

Details of each submission

From Color Diagnostics, LLC DBA Color Health, SCV004357388.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (3)

Description

This variant affects a cysteine residue located within a calcium-binding EGF-like domain of the FBN1 protein. Cysteine residues in cbEGF-like domains are involved in the formation of disulfide bridges, which are critical for FBN1 protein structure and stability (PMID: 4750422, 16677079). Computational prediction also suggests that this variant may have deleterious impact on protein structure and function (internally defined REVEL score threshold >= 0.7, PMID: 27666373). To our knowledge, this variant has not been reported in individuals affected with cardiovascular disorders in the literature. This variant has not been identified in the general population by the Genome Aggregation Database (gnomAD). A different missense variant disrupting the same cysteine residue, p.Cys1402Tyr, is considered to be disease-causing (ClinVar variation ID: 519799), suggesting that cysteine at this position is important for the protein function. Based on the available evidence, this variant is classified as Likely Pathogenic.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Feb 20, 2024