NM_002181.4(IHH):c.298G>A (p.Asp100Asn) AND not provided

Germline classification:: Pathogenic (1 submission)
Last evaluated:: Oct 4, 2023
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV003441711.1

Allele description [Variation Report for NM_002181.4(IHH):c.298G>A (p.Asp100Asn)]

NM_002181.4(IHH):c.298G>A (p.Asp100Asn)

Gene:

IHH:Indian hedgehog signaling molecule [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

2q35

Genomic location:

Preferred name:

NM_002181.4(IHH):c.298G>A (p.Asp100Asn)

HGVS:

NC_000002.12:g.219060170C>T
NG_016741.1:g.5347G>A
NM_002181.4:c.298G>AMANE SELECT
NP_002172.2:p.Asp100Asn
NC_000002.11:g.219924892C>T
NM_002181.3:c.298G>A
Q14623:p.Asp100Asn

Protein change:

D100N; ASP100ASN

Links:

UniProtKB: Q14623#VAR_015984; OMIM: 600726.0004; dbSNP: rs121917855

NCBI 1000 Genomes Browser:

rs121917855

Molecular consequence:

NM_002181.4:c.298G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: C3661900

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV004168173	GeneDx	criteria provided, single submitter (GeneDx Variant Classification Process June 2021)	Pathogenic (Oct 4, 2023)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV004168173

GeneDx

criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)

Pathogenic
(Oct 4, 2023)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From GeneDx, SCV004168173.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

No data available from control populations to assess the frequency of this variant; In silico analysis supports that this missense variant has a deleterious effect on protein structure/function; This variant is associated with the following publications: (PMID: 15886999, 28794911, 17486609, 12384778, 19277064, 12566523, 25696018, 21537345, 34315464, 32209048)

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Oct 8, 2024

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