NM_000551.4(VHL):c.218A>G (p.Gln73Arg) AND VHL-related disorder

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Sep 18, 2023
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV003403638.4

Allele description [Variation Report for NM_000551.4(VHL):c.218A>G (p.Gln73Arg)]

NM_000551.4(VHL):c.218A>G (p.Gln73Arg)

Gene:

VHL:von Hippel-Lindau tumor suppressor [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

3p25.3

Genomic location:

Preferred name:

NM_000551.4(VHL):c.218A>G (p.Gln73Arg)

HGVS:

NC_000003.12:g.10142065A>G
NG_008212.3:g.5431A>G
NM_000551.4:c.218A>GMANE SELECT
NM_001354723.2:c.218A>G
NM_198156.3:c.218A>G
NP_000542.1:p.Gln73Arg
NP_000542.1:p.Gln73Arg
NP_001341652.1:p.Gln73Arg
NP_937799.1:p.Gln73Arg
LRG_322t1:c.218A>G
LRG_322:g.5431A>G
LRG_322p1:p.Gln73Arg
NC_000003.11:g.10183749A>G
NM_000551.3:c.218A>G

Protein change:

Q73R

Links:

dbSNP: rs1295818809

NCBI 1000 Genomes Browser:

rs1295818809

Molecular consequence:

NM_000551.4:c.218A>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001354723.2:c.218A>G - missense variant - [Sequence Ontology: SO:0001583]
NM_198156.3:c.218A>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:: VHL-related disorder
Synonyms:: VHL-related condition
Identifiers:

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

Help

Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV004103602	PreventionGenetics, part of Exact Sciences	criteria provided, single submitter (ACMG Guidelines, 2015)	Uncertain significance (Sep 18, 2023)	germline	clinical testing	PubMed (1) [See all records that cite this PMID]

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV004103602

PreventionGenetics, part of Exact Sciences

criteria provided, single submitter

(ACMG Guidelines, 2015)

Uncertain significance
(Sep 18, 2023)

germline

clinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]

PMID:: 25741868
PMCID:: PMC4544753

Details of each submission

From PreventionGenetics, part of Exact Sciences, SCV004103602.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	PubMed (1)

Description

The VHL c.218A>G variant is predicted to result in the amino acid substitution p.Gln73Arg. This variant has been reported with uncertain significance in a large study of individuals with personal or family history of breast and/or ovarian cancer (Table S5 in Tsaousis et al. 2019. PubMed ID: 31159747). This variant has not been reported in a large population database (http://gnomad.broadinstitute.org), indicating this variant is rare. This variant has been classified as uncertain in the ClinVar database (https://www.ncbi.nlm.nih.gov/clinvar/variation/584568/). At this time, the clinical significance of this variant is uncertain due to the absence of conclusive functional and genetic evidence.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Sep 29, 2024

ClinVar

Relating variation to medicine