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NM_001354712.2(THRB):c.1030G>A (p.Gly344Arg) AND THRB-related disorder

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Apr 28, 2023
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003400020.4

Allele description [Variation Report for NM_001354712.2(THRB):c.1030G>A (p.Gly344Arg)]

NM_001354712.2(THRB):c.1030G>A (p.Gly344Arg)

Gene:
THRB:thyroid hormone receptor beta [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p24.2
Genomic location:
Preferred name:
NM_001354712.2(THRB):c.1030G>A (p.Gly344Arg)
HGVS:
  • NC_000003.12:g.24127613C>T
  • NG_009159.1:g.372210G>A
  • NM_000461.5:c.1030G>A
  • NM_001128176.3:c.1030G>A
  • NM_001128177.2:c.1030G>A
  • NM_001252634.2:c.1030G>A
  • NM_001354708.2:c.1030G>A
  • NM_001354709.2:c.1030G>A
  • NM_001354710.2:c.1030G>A
  • NM_001354711.2:c.1030G>A
  • NM_001354712.2:c.1030G>AMANE SELECT
  • NM_001354713.2:c.1030G>A
  • NM_001354714.2:c.937G>A
  • NM_001354715.2:c.937G>A
  • NM_001374822.1:c.1030G>A
  • NM_001374823.1:c.1030G>A
  • NM_001374824.1:c.1030G>A
  • NM_001374825.1:c.1030G>A
  • NM_001374826.1:c.1030G>A
  • NM_001374827.1:c.973+57G>A
  • NP_000452.2:p.Gly344Arg
  • NP_001121648.1:p.Gly344Arg
  • NP_001121649.1:p.Gly344Arg
  • NP_001239563.1:p.Gly344Arg
  • NP_001341637.1:p.Gly344Arg
  • NP_001341638.1:p.Gly344Arg
  • NP_001341639.1:p.Gly344Arg
  • NP_001341640.1:p.Gly344Arg
  • NP_001341641.1:p.Gly344Arg
  • NP_001341642.1:p.Gly344Arg
  • NP_001341643.1:p.Gly313Arg
  • NP_001341644.1:p.Gly313Arg
  • NP_001361751.1:p.Gly344Arg
  • NP_001361752.1:p.Gly344Arg
  • NP_001361753.1:p.Gly344Arg
  • NP_001361754.1:p.Gly344Arg
  • NP_001361755.1:p.Gly344Arg
  • NC_000003.11:g.24169104C>T
  • NM_001252634.1:c.1030G>A
Protein change:
G313R
Molecular consequence:
  • NM_001374827.1:c.973+57G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000461.5:c.1030G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001128176.3:c.1030G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001128177.2:c.1030G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001252634.2:c.1030G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354708.2:c.1030G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354709.2:c.1030G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354710.2:c.1030G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354711.2:c.1030G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354712.2:c.1030G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354713.2:c.1030G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354714.2:c.937G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354715.2:c.937G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001374822.1:c.1030G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001374823.1:c.1030G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001374824.1:c.1030G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001374825.1:c.1030G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001374826.1:c.1030G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
THRB-related disorder
Synonyms:
THRB-related condition
Identifiers:

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV004112327PreventionGenetics, part of Exact Sciences
criteria provided, single submitter

(ACMG Guidelines, 2015)
Likely pathogenic
(Apr 28, 2023)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From PreventionGenetics, part of Exact Sciences, SCV004112327.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)

Description

The THRB c.1030G>A variant is predicted to result in the amino acid substitution p.Gly344Arg. This variant has been reported in the heterozygous state in individuals with resistance to thyroid hormone (Cunha et al. 2019. PubMed ID: 31326901; https://austinpublishinggroup.com/pediatric-endocrinology/fulltext/jpe-v8-id1056.php). Different missense variants in the same codon (c.1031G>A,p.Gly344Glu; c.1031G>C,p.Gly344Ala) have been reported in individuals with resistance to thyroid hormone (Adams et al. 1994. PubMed ID: 8040303; Kvistad et al. 2004. PubMed ID: 15080770) suggesting that substitution of amino acid residue p.Gly344 is not tolerated. This variant has not been reported in a large population database (http://gnomad.broadinstitute.org), indicating this variant is rare. This variant is interpreted as likely pathogenic.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: May 19, 2024