NM_000843.4(GRM6):c.404C>G (p.Pro135Arg) AND Inborn genetic diseases

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Aug 4, 2023
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV003346366.2

Allele description [Variation Report for NM_000843.4(GRM6):c.404C>G (p.Pro135Arg)]

NM_000843.4(GRM6):c.404C>G (p.Pro135Arg)

Gene:

GRM6:glutamate metabotropic receptor 6 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

5q35.3

Genomic location:

Preferred name:

NM_000843.4(GRM6):c.404C>G (p.Pro135Arg)

HGVS:

NC_000005.10:g.178994541G>C
NG_008105.1:g.5583C>G
NM_000843.4:c.404C>GMANE SELECT
NP_000834.2:p.Pro135Arg
LRG_1236t1:c.404C>G
LRG_1236:g.5583C>G
LRG_1236p1:p.Pro135Arg
NC_000005.9:g.178421542G>C
NM_000843.3:c.404C>G

Protein change:

P135R

Links:

dbSNP: rs1034464770

NCBI 1000 Genomes Browser:

rs1034464770

Molecular consequence:

NM_000843.4:c.404C>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:: Inborn genetic diseases
Identifiers:: MeSH: D030342; MedGen: C0950123

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BioAssay by Target (List) for Gene (Select 12236) (3)
PubChem BioAssay
Bmf BCL2 modifying factor [Mus musculus]
Bmf BCL2 modifying factor [Mus musculus]
Gene ID:171543

Gene
LINC00310 long intergenic non-protein coding RNA 310 [Homo sapiens]
LINC00310 long intergenic non-protein coding RNA 310 [Homo sapiens]
Gene ID:114036

Gene

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV004061113	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Aug 4, 2023)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV004061113

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Aug 4, 2023)

germline

clinical testing

Citation Link

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Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV004061113.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.404C>G (p.P135R) alteration is located in exon 1 (coding exon 1) of the GRM6 gene. This alteration results from a C to G substitution at nucleotide position 404, causing the proline (P) at amino acid position 135 to be replaced by an arginine (R). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Sep 29, 2024

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