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NM_005476.7(GNE):c.1412G>A (p.Gly471Asp) AND GNE myopathy

Germline classification:
Likely pathogenic (1 submission)
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003319384.1

Allele description [Variation Report for NM_005476.7(GNE):c.1412G>A (p.Gly471Asp)]

NM_005476.7(GNE):c.1412G>A (p.Gly471Asp)

Gene:
GNE:glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
9p13.3
Genomic location:
Preferred name:
NM_005476.7(GNE):c.1412G>A (p.Gly471Asp)
HGVS:
  • NC_000009.12:g.36222998C>T
  • NG_008246.1:g.59047G>A
  • NM_001128227.3:c.1505G>A
  • NM_001190383.3:c.1411+375G>A
  • NM_001190384.3:c.1082G>A
  • NM_001190388.2:c.1235G>A
  • NM_001374797.1:c.1259G>A
  • NM_001374798.1:c.1235G>A
  • NM_005476.7:c.1412G>AMANE SELECT
  • NP_001121699.1:p.Gly502Asp
  • NP_001177313.1:p.Gly361Asp
  • NP_001177317.2:p.Gly412Asp
  • NP_001361726.1:p.Gly420Asp
  • NP_001361727.1:p.Gly412Asp
  • NP_005467.1:p.Gly471Asp
  • LRG_1197t1:c.1505G>A
  • LRG_1197t2:c.1412G>A
  • LRG_1197:g.59047G>A
  • LRG_1197p1:p.Gly502Asp
  • LRG_1197p2:p.Gly471Asp
  • NC_000009.11:g.36222995C>T
Protein change:
G361D
Links:
dbSNP: rs1439999698
NCBI 1000 Genomes Browser:
rs1439999698
Molecular consequence:
  • NM_001190383.3:c.1411+375G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001128227.3:c.1505G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001190384.3:c.1082G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001190388.2:c.1235G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001374797.1:c.1259G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001374798.1:c.1235G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_005476.7:c.1412G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
GNE myopathy (NM)
Synonyms:
Nonaka myopathy; Nonaka distal myopathy; INCLUSION BODY MYOPATHY, HEREDITARY, AUTOSOMAL RECESSIVE; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0011603; MedGen: C1853926; Orphanet: 602; OMIM: 605820

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV004023296Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India
criteria provided, single submitter

(ACMG Guidelines, 2015)
Likely pathogenicpaternalclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedpaternalyesnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India, SCV004023296.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1paternalyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Mar 16, 2024